Protein–RNA interactions for Protein: P07903

Ercc1, DNA excision repair protein ERCC-1, mousemouse

Predictions only

Length 298 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc1P07903 Gm9910-201ENSMUST00000195385 1550 ntBASIC18.16■□□□□ 0.5
Ercc1P07903 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ercc1P07903 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ercc1P07903 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ercc1P07903 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ercc1P07903 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ercc1P07903 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ercc1P07903 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC18.15■□□□□ 0.5
Ercc1P07903 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ercc1P07903 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Ercc1P07903 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ercc1P07903 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
Ercc1P07903 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ercc1P07903 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ercc1P07903 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ercc1P07903 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC18.13■□□□□ 0.49
Ercc1P07903 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Ercc1P07903 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Ercc1P07903 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ercc1P07903 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Ercc1P07903 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC18.13■□□□□ 0.49
Ercc1P07903 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ercc1P07903 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Ercc1P07903 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC18.12■□□□□ 0.49
Ercc1P07903 Gm28731-201ENSMUST00000185564 1569 ntBASIC18.12■□□□□ 0.49
Ercc1P07903 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ercc1P07903 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ercc1P07903 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ercc1P07903 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ercc1P07903 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ercc1P07903 Gm42809-201ENSMUST00000198429 1138 ntBASIC18.1■□□□□ 0.49
Ercc1P07903 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ercc1P07903 Gm38160-201ENSMUST00000193090 2499 ntBASIC18.1■□□□□ 0.49
Ercc1P07903 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ercc1P07903 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ercc1P07903 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC18.09■□□□□ 0.49
Ercc1P07903 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
Ercc1P07903 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ercc1P07903 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ercc1P07903 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC18.08■□□□□ 0.48
Ercc1P07903 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Ercc1P07903 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Ercc1P07903 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Ercc1P07903 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Ercc1P07903 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ercc1P07903 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ercc1P07903 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ercc1P07903 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC18.07■□□□□ 0.48
Ercc1P07903 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ercc1P07903 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ercc1P07903 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ercc1P07903 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Ercc1P07903 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Ercc1P07903 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ercc1P07903 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ercc1P07903 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Ercc1P07903 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Ercc1P07903 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ercc1P07903 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ercc1P07903 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC18.06■□□□□ 0.48
Ercc1P07903 Gm8503-201ENSMUST00000118131 455 ntBASIC18.06■□□□□ 0.48
Ercc1P07903 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC18.06■□□□□ 0.48
Ercc1P07903 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ercc1P07903 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ercc1P07903 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ercc1P07903 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Ercc1P07903 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Ercc1P07903 Gm32051-202ENSMUST00000197905 2385 ntBASIC18.05■□□□□ 0.48
Ercc1P07903 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Ercc1P07903 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Ercc1P07903 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ercc1P07903 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
Ercc1P07903 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ercc1P07903 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Ercc1P07903 Gm43006-201ENSMUST00000197702 1602 ntBASIC18.05■□□□□ 0.48
Ercc1P07903 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ercc1P07903 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
Ercc1P07903 Gm22567-201ENSMUST00000175542 342 ntBASIC18.04■□□□□ 0.48
Ercc1P07903 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Ercc1P07903 AC153524.1-201ENSMUST00000220436 1935 ntBASIC18.04■□□□□ 0.48
Ercc1P07903 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC18.03■□□□□ 0.48
Ercc1P07903 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ercc1P07903 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ercc1P07903 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Ercc1P07903 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC18.03■□□□□ 0.48
Ercc1P07903 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ercc1P07903 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ercc1P07903 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ercc1P07903 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ercc1P07903 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ercc1P07903 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Ercc1P07903 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
Ercc1P07903 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Ercc1P07903 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
Ercc1P07903 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.47
Ercc1P07903 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Ercc1P07903 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
Ercc1P07903 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ercc1P07903 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Ercc1P07903 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 11.9 ms