Protein–RNA interactions for Protein: P05771

PRKCB, Protein kinase C beta type, humanhuman

Predictions only

Length 671 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCBP05771 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
PRKCBP05771 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC26.41■■□□□ 1.82
PRKCBP05771 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
PRKCBP05771 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC26.41■■□□□ 1.82
PRKCBP05771 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
PRKCBP05771 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
PRKCBP05771 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
PRKCBP05771 AC010980.1-201ENST00000587192 1142 ntBASIC26.4■■□□□ 1.82
PRKCBP05771 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
PRKCBP05771 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
PRKCBP05771 RPS2P7-201ENST00000447334 885 ntBASIC26.39■■□□□ 1.82
PRKCBP05771 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.81
PRKCBP05771 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC26.39■■□□□ 1.81
PRKCBP05771 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
PRKCBP05771 AC074183.2-201ENST00000623112 922 ntBASIC26.38■■□□□ 1.81
PRKCBP05771 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC26.38■■□□□ 1.81
PRKCBP05771 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC26.37■■□□□ 1.81
PRKCBP05771 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
PRKCBP05771 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
PRKCBP05771 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC26.37■■□□□ 1.81
PRKCBP05771 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
PRKCBP05771 AC087393.1-201ENST00000582896 145 ntBASIC26.37■■□□□ 1.81
PRKCBP05771 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
PRKCBP05771 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC26.37■■□□□ 1.81
PRKCBP05771 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
PRKCBP05771 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC26.36■■□□□ 1.81
PRKCBP05771 BEX3-202ENST00000372634 753 ntTSL 2 BASIC26.35■■□□□ 1.81
PRKCBP05771 KRT18P10-201ENST00000388836 1287 ntBASIC26.35■■□□□ 1.81
PRKCBP05771 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC26.35■■□□□ 1.81
PRKCBP05771 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
PRKCBP05771 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
PRKCBP05771 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
PRKCBP05771 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
PRKCBP05771 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC26.34■■□□□ 1.81
PRKCBP05771 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
PRKCBP05771 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC26.34■■□□□ 1.81
PRKCBP05771 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC26.34■■□□□ 1.81
PRKCBP05771 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
PRKCBP05771 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
PRKCBP05771 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC26.33■■□□□ 1.81
PRKCBP05771 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC26.33■■□□□ 1.81
PRKCBP05771 PVT1_1.1-201ENST00000615125 194 ntBASIC26.33■■□□□ 1.81
PRKCBP05771 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
PRKCBP05771 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC26.33■■□□□ 1.8
PRKCBP05771 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
PRKCBP05771 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
PRKCBP05771 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC26.32■■□□□ 1.8
PRKCBP05771 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC26.32■■□□□ 1.8
PRKCBP05771 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC26.32■■□□□ 1.8
PRKCBP05771 RARRES2P1-201ENST00000474487 481 ntBASIC26.31■■□□□ 1.8
PRKCBP05771 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC26.31■■□□□ 1.8
PRKCBP05771 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
PRKCBP05771 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
PRKCBP05771 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC26.31■■□□□ 1.8
PRKCBP05771 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC26.3■■□□□ 1.8
PRKCBP05771 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
PRKCBP05771 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
PRKCBP05771 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC26.3■■□□□ 1.8
PRKCBP05771 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
PRKCBP05771 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC26.29■■□□□ 1.8
PRKCBP05771 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
PRKCBP05771 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC26.29■■□□□ 1.8
PRKCBP05771 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
PRKCBP05771 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC26.29■■□□□ 1.8
PRKCBP05771 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
PRKCBP05771 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC26.29■■□□□ 1.8
PRKCBP05771 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC26.28■■□□□ 1.8
PRKCBP05771 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
PRKCBP05771 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC26.28■■□□□ 1.8
PRKCBP05771 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
PRKCBP05771 ERN1-208ENST00000606895 2068 ntBASIC26.27■■□□□ 1.8
PRKCBP05771 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC26.27■■□□□ 1.8
PRKCBP05771 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
PRKCBP05771 KRT8P33-201ENST00000508125 1423 ntBASIC26.27■■□□□ 1.8
PRKCBP05771 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
PRKCBP05771 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC26.27■■□□□ 1.8
PRKCBP05771 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC26.27■■□□□ 1.8
PRKCBP05771 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
PRKCBP05771 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
PRKCBP05771 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
PRKCBP05771 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
PRKCBP05771 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC26.27■■□□□ 1.8
PRKCBP05771 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC26.27■■□□□ 1.8
PRKCBP05771 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC26.26■■□□□ 1.79
PRKCBP05771 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC26.26■■□□□ 1.79
PRKCBP05771 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
PRKCBP05771 IDNK-201ENST00000376417 511 ntTSL 5 BASIC26.26■■□□□ 1.79
PRKCBP05771 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
PRKCBP05771 MTX2-204ENST00000443241 799 ntTSL 3 BASIC26.26■■□□□ 1.79
PRKCBP05771 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC26.25■■□□□ 1.79
PRKCBP05771 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC26.25■■□□□ 1.79
PRKCBP05771 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
PRKCBP05771 LONRF2P2-201ENST00000439212 571 ntBASIC26.25■■□□□ 1.79
PRKCBP05771 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC26.25■■□□□ 1.79
PRKCBP05771 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC26.25■■□□□ 1.79
PRKCBP05771 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC26.25■■□□□ 1.79
PRKCBP05771 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
PRKCBP05771 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
PRKCBP05771 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
PRKCBP05771 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms