Protein–RNA interactions for Protein: P04441

Cd74, H-2 class II histocompatibility antigen gamma chain, mousemouse

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd74P04441 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Cd74P04441 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cd74P04441 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cd74P04441 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cd74P04441 Gm44428-201ENSMUST00000204474 874 ntBASIC18.13■□□□□ 0.49
Cd74P04441 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cd74P04441 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Cd74P04441 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Cd74P04441 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cd74P04441 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cd74P04441 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Cd74P04441 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cd74P04441 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cd74P04441 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Cd74P04441 Gm10420-201ENSMUST00000121713 882 ntBASIC18.12■□□□□ 0.49
Cd74P04441 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cd74P04441 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cd74P04441 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cd74P04441 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cd74P04441 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Cd74P04441 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cd74P04441 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cd74P04441 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cd74P04441 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cd74P04441 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Cd74P04441 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC18.1■□□□□ 0.49
Cd74P04441 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cd74P04441 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cd74P04441 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cd74P04441 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC18.1■□□□□ 0.49
Cd74P04441 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Cd74P04441 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC18.1■□□□□ 0.49
Cd74P04441 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cd74P04441 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cd74P04441 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Cd74P04441 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cd74P04441 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cd74P04441 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cd74P04441 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC18.09■□□□□ 0.49
Cd74P04441 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cd74P04441 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC18.09■□□□□ 0.49
Cd74P04441 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Cd74P04441 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC18.08■□□□□ 0.49
Cd74P04441 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC18.08■□□□□ 0.48
Cd74P04441 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Cd74P04441 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Cd74P04441 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Cd74P04441 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
Cd74P04441 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC18.08■□□□□ 0.48
Cd74P04441 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cd74P04441 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC18.07■□□□□ 0.48
Cd74P04441 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cd74P04441 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cd74P04441 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Cd74P04441 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Cd74P04441 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cd74P04441 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Cd74P04441 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cd74P04441 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Cd74P04441 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Cd74P04441 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Cd74P04441 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Cd74P04441 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cd74P04441 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cd74P04441 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cd74P04441 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cd74P04441 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cd74P04441 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
Cd74P04441 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cd74P04441 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Cd74P04441 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Cd74P04441 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC18.04■□□□□ 0.48
Cd74P04441 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cd74P04441 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cd74P04441 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cd74P04441 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cd74P04441 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Cd74P04441 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cd74P04441 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Cd74P04441 AC151971.4-201ENSMUST00000214717 704 ntBASIC18.03■□□□□ 0.48
Cd74P04441 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cd74P04441 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cd74P04441 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cd74P04441 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC18.03■□□□□ 0.48
Cd74P04441 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
Cd74P04441 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Cd74P04441 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC18.02■□□□□ 0.48
Cd74P04441 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Cd74P04441 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC18.02■□□□□ 0.48
Cd74P04441 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.47
Cd74P04441 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.47
Cd74P04441 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Cd74P04441 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.47
Cd74P04441 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
Cd74P04441 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
Cd74P04441 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cd74P04441 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cd74P04441 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Cd74P04441 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
Cd74P04441 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 42.3 ms