Protein–RNA interactions for Protein: O95777

LSM8, U6 snRNA-associated Sm-like protein LSm8, humanhuman

Known RBP Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM8O95777 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC25.47■■□□□ 1.67
LSM8O95777 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
LSM8O95777 RAP2CP1-202ENST00000605179 643 ntBASIC25.47■■□□□ 1.67
LSM8O95777 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
LSM8O95777 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
LSM8O95777 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
LSM8O95777 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC25.47■■□□□ 1.67
LSM8O95777 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC25.46■■□□□ 1.67
LSM8O95777 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
LSM8O95777 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
LSM8O95777 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
LSM8O95777 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC25.46■■□□□ 1.67
LSM8O95777 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC25.45■■□□□ 1.66
LSM8O95777 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC25.45■■□□□ 1.66
LSM8O95777 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
LSM8O95777 AC020928.2-201ENST00000588717 2197 ntBASIC25.45■■□□□ 1.66
LSM8O95777 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
LSM8O95777 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
LSM8O95777 AC026202.3-201ENST00000600805 1127 ntBASIC25.44■■□□□ 1.66
LSM8O95777 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
LSM8O95777 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
LSM8O95777 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC25.44■■□□□ 1.66
LSM8O95777 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
LSM8O95777 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC25.43■■□□□ 1.66
LSM8O95777 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
LSM8O95777 HSD17B1P1-201ENST00000590052 955 ntBASIC25.43■■□□□ 1.66
LSM8O95777 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC25.43■■□□□ 1.66
LSM8O95777 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
LSM8O95777 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC25.42■■□□□ 1.66
LSM8O95777 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
LSM8O95777 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
LSM8O95777 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC25.42■■□□□ 1.66
LSM8O95777 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
LSM8O95777 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
LSM8O95777 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC25.41■■□□□ 1.66
LSM8O95777 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC25.41■■□□□ 1.66
LSM8O95777 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC25.41■■□□□ 1.66
LSM8O95777 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
LSM8O95777 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
LSM8O95777 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC25.4■■□□□ 1.66
LSM8O95777 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC25.4■■□□□ 1.66
LSM8O95777 HES4-204ENST00000484667 667 ntTSL 3 BASIC25.39■■□□□ 1.66
LSM8O95777 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
LSM8O95777 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC25.39■■□□□ 1.65
LSM8O95777 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
LSM8O95777 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
LSM8O95777 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC25.39■■□□□ 1.65
LSM8O95777 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
LSM8O95777 RARRES2P2-201ENST00000394842 485 ntBASIC25.38■■□□□ 1.65
LSM8O95777 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
LSM8O95777 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
LSM8O95777 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
LSM8O95777 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
LSM8O95777 AC097639.1-201ENST00000565519 1891 ntBASIC25.37■■□□□ 1.65
LSM8O95777 AC009831.1-201ENST00000580420 1582 ntBASIC25.37■■□□□ 1.65
LSM8O95777 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC25.37■■□□□ 1.65
LSM8O95777 SNAI3-AS1-204ENST00000567997 2048 ntBASIC25.37■■□□□ 1.65
LSM8O95777 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC25.37■■□□□ 1.65
LSM8O95777 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC25.37■■□□□ 1.65
LSM8O95777 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
LSM8O95777 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
LSM8O95777 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC25.36■■□□□ 1.65
LSM8O95777 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
LSM8O95777 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
LSM8O95777 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC25.36■■□□□ 1.65
LSM8O95777 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
LSM8O95777 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
LSM8O95777 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC25.35■■□□□ 1.65
LSM8O95777 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
LSM8O95777 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC25.35■■□□□ 1.65
LSM8O95777 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC25.34■■□□□ 1.65
LSM8O95777 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
LSM8O95777 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
LSM8O95777 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC25.34■■□□□ 1.65
LSM8O95777 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC25.34■■□□□ 1.65
LSM8O95777 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC25.34■■□□□ 1.65
LSM8O95777 CEBPA-AS1-201ENST00000592982 2198 ntBASIC25.34■■□□□ 1.65
LSM8O95777 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
LSM8O95777 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
LSM8O95777 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC25.33■■□□□ 1.65
LSM8O95777 AC133552.2-201ENST00000619106 1032 ntBASIC25.33■■□□□ 1.65
LSM8O95777 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
LSM8O95777 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
LSM8O95777 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC25.32■■□□□ 1.64
LSM8O95777 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
LSM8O95777 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
LSM8O95777 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
LSM8O95777 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
LSM8O95777 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC25.31■■□□□ 1.64
LSM8O95777 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
LSM8O95777 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC25.31■■□□□ 1.64
LSM8O95777 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC25.31■■□□□ 1.64
LSM8O95777 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC25.31■■□□□ 1.64
LSM8O95777 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC25.3■■□□□ 1.64
LSM8O95777 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC25.3■■□□□ 1.64
LSM8O95777 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
LSM8O95777 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
LSM8O95777 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC25.3■■□□□ 1.64
LSM8O95777 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
LSM8O95777 HYI-213ENST00000583037 1322 ntTSL 5 BASIC25.3■■□□□ 1.64
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms