Protein–RNA interactions for Protein: O88543

Cops3, COP9 signalosome complex subunit 3, mousemouse

Predictions only

Length 423 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops3O88543 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cops3O88543 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Cops3O88543 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cops3O88543 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cops3O88543 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC19.41■□□□□ 0.7
Cops3O88543 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cops3O88543 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Cops3O88543 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cops3O88543 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cops3O88543 AC153962.1-201ENSMUST00000218530 1948 ntBASIC19.41■□□□□ 0.7
Cops3O88543 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Cops3O88543 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC19.4■□□□□ 0.7
Cops3O88543 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cops3O88543 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Cops3O88543 Gm7432-201ENSMUST00000210343 879 ntBASIC19.4■□□□□ 0.7
Cops3O88543 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC19.4■□□□□ 0.7
Cops3O88543 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC19.39■□□□□ 0.7
Cops3O88543 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cops3O88543 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Cops3O88543 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Cops3O88543 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cops3O88543 AC115037.1-201ENSMUST00000223391 2173 ntBASIC19.39■□□□□ 0.69
Cops3O88543 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cops3O88543 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC19.38■□□□□ 0.69
Cops3O88543 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cops3O88543 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cops3O88543 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cops3O88543 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cops3O88543 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cops3O88543 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Cops3O88543 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC19.37■□□□□ 0.69
Cops3O88543 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Cops3O88543 Gm11599-201ENSMUST00000118720 878 ntBASIC19.37■□□□□ 0.69
Cops3O88543 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cops3O88543 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cops3O88543 AC153524.1-201ENSMUST00000220436 1935 ntBASIC19.37■□□□□ 0.69
Cops3O88543 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Cops3O88543 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cops3O88543 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cops3O88543 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cops3O88543 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Cops3O88543 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC19.36■□□□□ 0.69
Cops3O88543 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Cops3O88543 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cops3O88543 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cops3O88543 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Cops3O88543 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cops3O88543 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cops3O88543 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cops3O88543 Gm22567-201ENSMUST00000175542 342 ntBASIC19.34■□□□□ 0.69
Cops3O88543 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Cops3O88543 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Cops3O88543 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC19.33■□□□□ 0.69
Cops3O88543 Gm32051-202ENSMUST00000197905 2385 ntBASIC19.33■□□□□ 0.69
Cops3O88543 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Cops3O88543 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC19.33■□□□□ 0.68
Cops3O88543 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
Cops3O88543 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Cops3O88543 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Cops3O88543 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
Cops3O88543 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Cops3O88543 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Cops3O88543 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cops3O88543 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cops3O88543 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Cops3O88543 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cops3O88543 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cops3O88543 Notumos-201ENSMUST00000151998 2659 ntBASIC19.31■□□□□ 0.68
Cops3O88543 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cops3O88543 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cops3O88543 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Cops3O88543 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Cops3O88543 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Cops3O88543 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Cops3O88543 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cops3O88543 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cops3O88543 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Cops3O88543 Gm38160-201ENSMUST00000193090 2499 ntBASIC19.29■□□□□ 0.68
Cops3O88543 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cops3O88543 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC19.29■□□□□ 0.68
Cops3O88543 AC167019.3-201ENSMUST00000228225 1266 ntBASIC19.29■□□□□ 0.68
Cops3O88543 Pkd1-207ENSMUST00000228550 1050 ntBASIC19.29■□□□□ 0.68
Cops3O88543 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cops3O88543 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Cops3O88543 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cops3O88543 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cops3O88543 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC19.29■□□□□ 0.68
Cops3O88543 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cops3O88543 Gm9910-201ENSMUST00000195385 1550 ntBASIC19.28■□□□□ 0.68
Cops3O88543 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cops3O88543 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Cops3O88543 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Cops3O88543 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cops3O88543 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Cops3O88543 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Cops3O88543 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
Cops3O88543 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Cops3O88543 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cops3O88543 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cops3O88543 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 41.5 ms