Protein–RNA interactions for Protein: O88196

Ttc3, E3 ubiquitin-protein ligase TTC3, mousemouse

Known RBP Predictions only

Length 1,979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc3O88196 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Ttc3O88196 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC23.26■■□□□ 1.31
Ttc3O88196 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Ttc3O88196 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Ttc3O88196 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Ttc3O88196 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC23.25■■□□□ 1.31
Ttc3O88196 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC23.25■■□□□ 1.31
Ttc3O88196 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC23.25■■□□□ 1.31
Ttc3O88196 Gm28731-201ENSMUST00000185564 1569 ntBASIC23.25■■□□□ 1.31
Ttc3O88196 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC23.25■■□□□ 1.31
Ttc3O88196 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Ttc3O88196 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Ttc3O88196 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
Ttc3O88196 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC23.24■■□□□ 1.31
Ttc3O88196 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC23.23■■□□□ 1.31
Ttc3O88196 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Ttc3O88196 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC23.23■■□□□ 1.31
Ttc3O88196 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Ttc3O88196 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC23.23■■□□□ 1.31
Ttc3O88196 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
Ttc3O88196 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
Ttc3O88196 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC23.22■■□□□ 1.31
Ttc3O88196 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Ttc3O88196 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Ttc3O88196 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC23.21■■□□□ 1.31
Ttc3O88196 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC23.21■■□□□ 1.31
Ttc3O88196 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Ttc3O88196 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC23.21■■□□□ 1.31
Ttc3O88196 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC23.21■■□□□ 1.31
Ttc3O88196 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC23.2■■□□□ 1.3
Ttc3O88196 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Ttc3O88196 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Ttc3O88196 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC23.2■■□□□ 1.3
Ttc3O88196 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC23.2■■□□□ 1.3
Ttc3O88196 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC23.19■■□□□ 1.3
Ttc3O88196 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Ttc3O88196 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Ttc3O88196 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
Ttc3O88196 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Ttc3O88196 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
Ttc3O88196 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC23.19■■□□□ 1.3
Ttc3O88196 Nsd1-206ENSMUST00000224918 1001 ntBASIC23.19■■□□□ 1.3
Ttc3O88196 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Ttc3O88196 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC23.19■■□□□ 1.3
Ttc3O88196 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
Ttc3O88196 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Ttc3O88196 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Ttc3O88196 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC23.17■■□□□ 1.3
Ttc3O88196 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Ttc3O88196 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
Ttc3O88196 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC23.16■■□□□ 1.3
Ttc3O88196 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC23.16■■□□□ 1.3
Ttc3O88196 Gm6934-201ENSMUST00000194780 1905 ntBASIC23.16■■□□□ 1.3
Ttc3O88196 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
Ttc3O88196 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
Ttc3O88196 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Ttc3O88196 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Ttc3O88196 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC23.15■■□□□ 1.3
Ttc3O88196 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC23.14■■□□□ 1.3
Ttc3O88196 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC23.14■■□□□ 1.29
Ttc3O88196 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.29
Ttc3O88196 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC23.14■■□□□ 1.29
Ttc3O88196 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC23.14■■□□□ 1.29
Ttc3O88196 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.29
Ttc3O88196 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Ttc3O88196 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Ttc3O88196 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Ttc3O88196 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
Ttc3O88196 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC23.13■■□□□ 1.29
Ttc3O88196 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Ttc3O88196 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
Ttc3O88196 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Ttc3O88196 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Ttc3O88196 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC23.12■■□□□ 1.29
Ttc3O88196 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC23.12■■□□□ 1.29
Ttc3O88196 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Ttc3O88196 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC23.12■■□□□ 1.29
Ttc3O88196 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Ttc3O88196 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Ttc3O88196 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Ttc3O88196 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Ttc3O88196 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Ttc3O88196 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
Ttc3O88196 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC23.11■■□□□ 1.29
Ttc3O88196 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Ttc3O88196 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
Ttc3O88196 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC23.1■■□□□ 1.29
Ttc3O88196 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Ttc3O88196 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC23.09■■□□□ 1.29
Ttc3O88196 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC23.09■■□□□ 1.29
Ttc3O88196 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC23.09■■□□□ 1.29
Ttc3O88196 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
Ttc3O88196 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC23.09■■□□□ 1.29
Ttc3O88196 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Ttc3O88196 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Ttc3O88196 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC23.08■■□□□ 1.29
Ttc3O88196 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC23.08■■□□□ 1.29
Ttc3O88196 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
Ttc3O88196 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
Ttc3O88196 Gm5131-201ENSMUST00000212776 1238 ntBASIC23.07■■□□□ 1.28
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms