Protein–RNA interactions for Protein: O75365

PTP4A3, Protein tyrosine phosphatase type IVA 3, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3O75365 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PTP4A3O75365 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PTP4A3O75365 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
PTP4A3O75365 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PTP4A3O75365 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PTP4A3O75365 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC21.68■■□□□ 1.06
PTP4A3O75365 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
PTP4A3O75365 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PTP4A3O75365 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC21.67■■□□□ 1.06
PTP4A3O75365 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
PTP4A3O75365 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
PTP4A3O75365 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC21.67■■□□□ 1.06
PTP4A3O75365 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC21.66■■□□□ 1.06
PTP4A3O75365 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
PTP4A3O75365 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
PTP4A3O75365 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
PTP4A3O75365 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
PTP4A3O75365 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
PTP4A3O75365 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
PTP4A3O75365 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
PTP4A3O75365 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC21.65■■□□□ 1.06
PTP4A3O75365 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
PTP4A3O75365 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
PTP4A3O75365 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
PTP4A3O75365 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
PTP4A3O75365 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC21.64■■□□□ 1.05
PTP4A3O75365 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC21.64■■□□□ 1.05
PTP4A3O75365 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
PTP4A3O75365 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
PTP4A3O75365 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC21.63■■□□□ 1.05
PTP4A3O75365 AC097639.1-201ENST00000565519 1891 ntBASIC21.63■■□□□ 1.05
PTP4A3O75365 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
PTP4A3O75365 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
PTP4A3O75365 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC21.63■■□□□ 1.05
PTP4A3O75365 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PTP4A3O75365 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC21.62■■□□□ 1.05
PTP4A3O75365 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
PTP4A3O75365 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
PTP4A3O75365 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PTP4A3O75365 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
PTP4A3O75365 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC21.62■■□□□ 1.05
PTP4A3O75365 PFN2-211ENST00000489155 636 ntTSL 4 BASIC21.62■■□□□ 1.05
PTP4A3O75365 AL157400.5-201ENST00000507624 621 ntBASIC21.62■■□□□ 1.05
PTP4A3O75365 AC025884.2-201ENST00000553429 711 ntBASIC21.62■■□□□ 1.05
PTP4A3O75365 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PTP4A3O75365 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PTP4A3O75365 AL139125.2-201ENST00000623134 1869 ntBASIC21.62■■□□□ 1.05
PTP4A3O75365 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
PTP4A3O75365 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
PTP4A3O75365 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
PTP4A3O75365 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC21.61■■□□□ 1.05
PTP4A3O75365 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
PTP4A3O75365 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
PTP4A3O75365 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC21.61■■□□□ 1.05
PTP4A3O75365 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC21.61■■□□□ 1.05
PTP4A3O75365 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
PTP4A3O75365 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC21.61■■□□□ 1.05
PTP4A3O75365 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
PTP4A3O75365 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
PTP4A3O75365 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
PTP4A3O75365 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
PTP4A3O75365 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
PTP4A3O75365 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
PTP4A3O75365 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
PTP4A3O75365 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
PTP4A3O75365 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
PTP4A3O75365 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
PTP4A3O75365 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC21.59■■□□□ 1.05
PTP4A3O75365 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
PTP4A3O75365 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
PTP4A3O75365 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
PTP4A3O75365 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
PTP4A3O75365 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
PTP4A3O75365 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC21.59■■□□□ 1.05
PTP4A3O75365 AC060814.1-201ENST00000554326 538 ntBASIC21.59■■□□□ 1.05
PTP4A3O75365 MOB2-207ENST00000614710 705 ntTSL 5 BASIC21.59■■□□□ 1.05
PTP4A3O75365 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
PTP4A3O75365 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
PTP4A3O75365 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.05
PTP4A3O75365 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
PTP4A3O75365 PREB-202ENST00000406567 1910 ntTSL 5 BASIC21.58■■□□□ 1.04
PTP4A3O75365 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC21.58■■□□□ 1.04
PTP4A3O75365 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
PTP4A3O75365 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
PTP4A3O75365 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
PTP4A3O75365 SLC6A10P-202ENST00000431994 2058 ntBASIC21.57■■□□□ 1.04
PTP4A3O75365 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
PTP4A3O75365 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
PTP4A3O75365 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
PTP4A3O75365 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
PTP4A3O75365 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC21.56■■□□□ 1.04
PTP4A3O75365 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
PTP4A3O75365 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
PTP4A3O75365 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
PTP4A3O75365 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
PTP4A3O75365 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
PTP4A3O75365 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
PTP4A3O75365 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
PTP4A3O75365 MIR7108-201ENST00000614319 87 ntBASIC21.56■■□□□ 1.04
PTP4A3O75365 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 62.2 ms