Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC21.78■■□□□ 1.08
ZIC3O60481 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
ZIC3O60481 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC21.78■■□□□ 1.08
ZIC3O60481 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC21.78■■□□□ 1.08
ZIC3O60481 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
ZIC3O60481 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
ZIC3O60481 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
ZIC3O60481 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC21.77■■□□□ 1.08
ZIC3O60481 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
ZIC3O60481 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
ZIC3O60481 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
ZIC3O60481 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC21.76■■□□□ 1.07
ZIC3O60481 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
ZIC3O60481 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC21.76■■□□□ 1.07
ZIC3O60481 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
ZIC3O60481 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC21.76■■□□□ 1.07
ZIC3O60481 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC21.76■■□□□ 1.07
ZIC3O60481 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC21.76■■□□□ 1.07
ZIC3O60481 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC21.76■■□□□ 1.07
ZIC3O60481 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
ZIC3O60481 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC21.76■■□□□ 1.07
ZIC3O60481 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
ZIC3O60481 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
ZIC3O60481 ERN1-208ENST00000606895 2068 ntBASIC21.75■■□□□ 1.07
ZIC3O60481 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
ZIC3O60481 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC21.75■■□□□ 1.07
ZIC3O60481 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC21.75■■□□□ 1.07
ZIC3O60481 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC21.75■■□□□ 1.07
ZIC3O60481 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
ZIC3O60481 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
ZIC3O60481 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
ZIC3O60481 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
ZIC3O60481 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
ZIC3O60481 KRT18P10-201ENST00000388836 1287 ntBASIC21.74■■□□□ 1.07
ZIC3O60481 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
ZIC3O60481 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
ZIC3O60481 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
ZIC3O60481 AC092803.2-201ENST00000564287 1899 ntBASIC21.73■■□□□ 1.07
ZIC3O60481 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
ZIC3O60481 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
ZIC3O60481 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
ZIC3O60481 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
ZIC3O60481 RPS2P7-201ENST00000447334 885 ntBASIC21.73■■□□□ 1.07
ZIC3O60481 AC087393.1-201ENST00000582896 145 ntBASIC21.73■■□□□ 1.07
ZIC3O60481 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
ZIC3O60481 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
ZIC3O60481 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC21.72■■□□□ 1.07
ZIC3O60481 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC21.72■■□□□ 1.07
ZIC3O60481 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC21.72■■□□□ 1.07
ZIC3O60481 HYI-210ENST00000486909 905 ntTSL 5 BASIC21.72■■□□□ 1.07
ZIC3O60481 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
ZIC3O60481 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
ZIC3O60481 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC21.72■■□□□ 1.07
ZIC3O60481 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC21.72■■□□□ 1.07
ZIC3O60481 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
ZIC3O60481 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
ZIC3O60481 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
ZIC3O60481 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
ZIC3O60481 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC21.71■■□□□ 1.07
ZIC3O60481 BHLHE23-202ENST00000612929 1109 ntBASIC21.71■■□□□ 1.07
ZIC3O60481 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC21.7■■□□□ 1.07
ZIC3O60481 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC21.7■■□□□ 1.06
ZIC3O60481 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC21.7■■□□□ 1.06
ZIC3O60481 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
ZIC3O60481 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
ZIC3O60481 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
ZIC3O60481 AC139795.1-202ENST00000500444 432 ntBASIC21.7■■□□□ 1.06
ZIC3O60481 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
ZIC3O60481 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
ZIC3O60481 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
ZIC3O60481 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
ZIC3O60481 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC21.69■■□□□ 1.06
ZIC3O60481 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
ZIC3O60481 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
ZIC3O60481 AC074183.2-201ENST00000623112 922 ntBASIC21.69■■□□□ 1.06
ZIC3O60481 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC21.69■■□□□ 1.06
ZIC3O60481 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
ZIC3O60481 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
ZIC3O60481 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC21.68■■□□□ 1.06
ZIC3O60481 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC21.68■■□□□ 1.06
ZIC3O60481 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
ZIC3O60481 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
ZIC3O60481 SNAI3-AS1-204ENST00000567997 2048 ntBASIC21.67■■□□□ 1.06
ZIC3O60481 AC010501.1-201ENST00000606270 1962 ntBASIC21.67■■□□□ 1.06
ZIC3O60481 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC21.67■■□□□ 1.06
ZIC3O60481 AC091060.1-201ENST00000623524 1766 ntBASIC21.67■■□□□ 1.06
ZIC3O60481 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
ZIC3O60481 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC21.67■■□□□ 1.06
ZIC3O60481 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC21.67■■□□□ 1.06
ZIC3O60481 AC010980.1-201ENST00000587192 1142 ntBASIC21.67■■□□□ 1.06
ZIC3O60481 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
ZIC3O60481 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC21.67■■□□□ 1.06
ZIC3O60481 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC21.66■■□□□ 1.06
ZIC3O60481 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
ZIC3O60481 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC21.66■■□□□ 1.06
ZIC3O60481 PVT1_1.1-201ENST00000615125 194 ntBASIC21.66■■□□□ 1.06
ZIC3O60481 AC096887.2-201ENST00000623443 1957 ntBASIC21.66■■□□□ 1.06
ZIC3O60481 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
ZIC3O60481 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
ZIC3O60481 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 83 ms