Protein–RNA interactions for Protein: O15417

TNRC18, Trinucleotide repeat-containing gene 18 protein, humanhuman

Predicted RBP Predictions only

Length 2,968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC18O15417 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
TNRC18O15417 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
TNRC18O15417 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
TNRC18O15417 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC27.12■■□□□ 1.93
TNRC18O15417 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC27.12■■□□□ 1.93
TNRC18O15417 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC27.12■■□□□ 1.93
TNRC18O15417 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
TNRC18O15417 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC27.11■■□□□ 1.93
TNRC18O15417 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
TNRC18O15417 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
TNRC18O15417 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC27.1■■□□□ 1.93
TNRC18O15417 AC022517.1-201ENST00000592429 346 ntBASIC27.1■■□□□ 1.93
TNRC18O15417 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
TNRC18O15417 AC024257.2-201ENST00000549699 147 ntBASIC27.09■■□□□ 1.93
TNRC18O15417 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC27.09■■□□□ 1.93
TNRC18O15417 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC27.09■■□□□ 1.93
TNRC18O15417 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC27.09■■□□□ 1.93
TNRC18O15417 ABHD17AP1-201ENST00000358206 933 ntBASIC27.09■■□□□ 1.93
TNRC18O15417 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC27.08■■□□□ 1.93
TNRC18O15417 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC27.08■■□□□ 1.93
TNRC18O15417 AC092437.1-201ENST00000624794 1048 ntBASIC27.08■■□□□ 1.93
TNRC18O15417 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC27.07■■□□□ 1.92
TNRC18O15417 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC27.07■■□□□ 1.92
TNRC18O15417 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC27.07■■□□□ 1.92
TNRC18O15417 MIR939-201ENST00000401314 82 ntBASIC27.07■■□□□ 1.92
TNRC18O15417 RBM38-205ENST00000440234 686 ntTSL 2 BASIC27.07■■□□□ 1.92
TNRC18O15417 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC27.07■■□□□ 1.92
TNRC18O15417 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC27.06■■□□□ 1.92
TNRC18O15417 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC27.06■■□□□ 1.92
TNRC18O15417 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC27.06■■□□□ 1.92
TNRC18O15417 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
TNRC18O15417 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
TNRC18O15417 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC27.06■■□□□ 1.92
TNRC18O15417 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
TNRC18O15417 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
TNRC18O15417 SENP5-202ENST00000419026 973 ntTSL 3 BASIC27.05■■□□□ 1.92
TNRC18O15417 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC27.05■■□□□ 1.92
TNRC18O15417 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
TNRC18O15417 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
TNRC18O15417 AL136162.1-201ENST00000607711 1078 ntBASIC27.04■■□□□ 1.92
TNRC18O15417 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC27.04■■□□□ 1.92
TNRC18O15417 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC27.04■■□□□ 1.92
TNRC18O15417 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
TNRC18O15417 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC27.04■■□□□ 1.92
TNRC18O15417 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC27.04■■□□□ 1.92
TNRC18O15417 AK3-203ENST00000447596 705 ntTSL 2 BASIC27.04■■□□□ 1.92
TNRC18O15417 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC27.03■■□□□ 1.92
TNRC18O15417 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC27.03■■□□□ 1.92
TNRC18O15417 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC27.03■■□□□ 1.92
TNRC18O15417 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC27.02■■□□□ 1.92
TNRC18O15417 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC27.02■■□□□ 1.92
TNRC18O15417 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC27.02■■□□□ 1.92
TNRC18O15417 AP001330.3-201ENST00000520123 633 ntBASIC27.02■■□□□ 1.92
TNRC18O15417 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC27.01■■□□□ 1.91
TNRC18O15417 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC27.01■■□□□ 1.91
TNRC18O15417 EXOG-217ENST00000630638 197 ntTSL 5 BASIC27.01■■□□□ 1.91
TNRC18O15417 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
TNRC18O15417 MIR4281-201ENST00000580852 62 ntBASIC27■■□□□ 1.91
TNRC18O15417 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC27■■□□□ 1.91
TNRC18O15417 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
TNRC18O15417 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC27■■□□□ 1.91
TNRC18O15417 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC27■■□□□ 1.91
TNRC18O15417 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC27■■□□□ 1.91
TNRC18O15417 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC26.99■■□□□ 1.91
TNRC18O15417 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC26.99■■□□□ 1.91
TNRC18O15417 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC26.99■■□□□ 1.91
TNRC18O15417 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC26.99■■□□□ 1.91
TNRC18O15417 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC26.99■■□□□ 1.91
TNRC18O15417 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC26.99■■□□□ 1.91
TNRC18O15417 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
TNRC18O15417 MTDHP2-201ENST00000601468 714 ntBASIC26.99■■□□□ 1.91
TNRC18O15417 AC066615.1-201ENST00000640911 628 ntBASIC26.99■■□□□ 1.91
TNRC18O15417 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
TNRC18O15417 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC26.98■■□□□ 1.91
TNRC18O15417 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC26.98■■□□□ 1.91
TNRC18O15417 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC26.97■■□□□ 1.91
TNRC18O15417 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC26.97■■□□□ 1.91
TNRC18O15417 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC26.97■■□□□ 1.91
TNRC18O15417 AL137784.2-201ENST00000607332 1000 ntBASIC26.97■■□□□ 1.91
TNRC18O15417 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC26.97■■□□□ 1.91
TNRC18O15417 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC26.97■■□□□ 1.91
TNRC18O15417 STOX2-205ENST00000513034 807 ntTSL 3 BASIC26.97■■□□□ 1.91
TNRC18O15417 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC26.97■■□□□ 1.91
TNRC18O15417 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC26.97■■□□□ 1.91
TNRC18O15417 AL359504.2-201ENST00000605506 1601 ntBASIC26.97■■□□□ 1.91
TNRC18O15417 HLA-L-209ENST00000420110 1011 ntBASIC26.97■■□□□ 1.91
TNRC18O15417 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC26.96■■□□□ 1.91
TNRC18O15417 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC26.96■■□□□ 1.91
TNRC18O15417 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
TNRC18O15417 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.91
TNRC18O15417 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.91
TNRC18O15417 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC26.95■■□□□ 1.9
TNRC18O15417 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
TNRC18O15417 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC26.95■■□□□ 1.9
TNRC18O15417 AF213884.3-201ENST00000563833 479 ntBASIC26.94■■□□□ 1.9
TNRC18O15417 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC26.94■■□□□ 1.9
TNRC18O15417 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
TNRC18O15417 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
TNRC18O15417 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC26.93■■□□□ 1.9
TNRC18O15417 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms