Protein–RNA interactions for Protein: O00305

CACNB4, Voltage-dependent L-type calcium channel subunit beta-4, humanhuman

Predicted RBP Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB4O00305 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC23.83■■□□□ 1.41
CACNB4O00305 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
CACNB4O00305 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
CACNB4O00305 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC23.81■■□□□ 1.4
CACNB4O00305 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
CACNB4O00305 PVT1_1.1-201ENST00000615125 194 ntBASIC23.81■■□□□ 1.4
CACNB4O00305 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
CACNB4O00305 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
CACNB4O00305 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
CACNB4O00305 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
CACNB4O00305 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
CACNB4O00305 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
CACNB4O00305 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
CACNB4O00305 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
CACNB4O00305 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC23.79■■□□□ 1.4
CACNB4O00305 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC23.79■■□□□ 1.4
CACNB4O00305 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CACNB4O00305 IDNK-201ENST00000376417 511 ntTSL 5 BASIC23.79■■□□□ 1.4
CACNB4O00305 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CACNB4O00305 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
CACNB4O00305 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC23.79■■□□□ 1.4
CACNB4O00305 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC23.79■■□□□ 1.4
CACNB4O00305 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
CACNB4O00305 AL121749.1-202ENST00000609313 2153 ntBASIC23.79■■□□□ 1.4
CACNB4O00305 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CACNB4O00305 AC019171.1-201ENST00000601251 1056 ntBASIC23.78■■□□□ 1.4
CACNB4O00305 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CACNB4O00305 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
CACNB4O00305 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC23.78■■□□□ 1.4
CACNB4O00305 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CACNB4O00305 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC23.78■■□□□ 1.4
CACNB4O00305 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CACNB4O00305 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CACNB4O00305 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CACNB4O00305 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC23.77■■□□□ 1.4
CACNB4O00305 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC23.77■■□□□ 1.4
CACNB4O00305 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC23.77■■□□□ 1.39
CACNB4O00305 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC23.76■■□□□ 1.39
CACNB4O00305 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CACNB4O00305 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
CACNB4O00305 MIR4508-201ENST00000584178 70 ntBASIC23.76■■□□□ 1.39
CACNB4O00305 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CACNB4O00305 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC23.76■■□□□ 1.39
CACNB4O00305 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
CACNB4O00305 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
CACNB4O00305 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
CACNB4O00305 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC23.75■■□□□ 1.39
CACNB4O00305 LONRF2P2-201ENST00000439212 571 ntBASIC23.75■■□□□ 1.39
CACNB4O00305 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
CACNB4O00305 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC23.75■■□□□ 1.39
CACNB4O00305 AC103834.1-201ENST00000520383 144 ntBASIC23.75■■□□□ 1.39
CACNB4O00305 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
CACNB4O00305 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
CACNB4O00305 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
CACNB4O00305 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC23.74■■□□□ 1.39
CACNB4O00305 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC23.74■■□□□ 1.39
CACNB4O00305 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC23.74■■□□□ 1.39
CACNB4O00305 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC23.74■■□□□ 1.39
CACNB4O00305 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC23.74■■□□□ 1.39
CACNB4O00305 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC23.73■■□□□ 1.39
CACNB4O00305 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC23.73■■□□□ 1.39
CACNB4O00305 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC23.73■■□□□ 1.39
CACNB4O00305 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC23.73■■□□□ 1.39
CACNB4O00305 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
CACNB4O00305 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC23.73■■□□□ 1.39
CACNB4O00305 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC23.72■■□□□ 1.39
CACNB4O00305 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC23.72■■□□□ 1.39
CACNB4O00305 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC23.72■■□□□ 1.39
CACNB4O00305 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
CACNB4O00305 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC23.72■■□□□ 1.39
CACNB4O00305 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC23.72■■□□□ 1.39
CACNB4O00305 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
CACNB4O00305 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC23.72■■□□□ 1.39
CACNB4O00305 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
CACNB4O00305 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
CACNB4O00305 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC23.71■■□□□ 1.39
CACNB4O00305 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC23.71■■□□□ 1.39
CACNB4O00305 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
CACNB4O00305 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC23.7■■□□□ 1.39
CACNB4O00305 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
CACNB4O00305 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC23.7■■□□□ 1.38
CACNB4O00305 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
CACNB4O00305 AL451085.2-201ENST00000605085 799 ntBASIC23.7■■□□□ 1.38
CACNB4O00305 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
CACNB4O00305 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC23.69■■□□□ 1.38
CACNB4O00305 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC23.69■■□□□ 1.38
CACNB4O00305 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC23.69■■□□□ 1.38
CACNB4O00305 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
CACNB4O00305 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC23.69■■□□□ 1.38
CACNB4O00305 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
CACNB4O00305 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
CACNB4O00305 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC23.68■■□□□ 1.38
CACNB4O00305 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC23.68■■□□□ 1.38
CACNB4O00305 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC23.68■■□□□ 1.38
CACNB4O00305 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC23.68■■□□□ 1.38
CACNB4O00305 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
CACNB4O00305 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC23.68■■□□□ 1.38
CACNB4O00305 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC23.68■■□□□ 1.38
CACNB4O00305 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
CACNB4O00305 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC23.67■■□□□ 1.38
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms