Protein–RNA interactions for Protein: A6NDS4

TBC1D3B, TBC1 domain family member 3B, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3BA6NDS4 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC24.63■■□□□ 1.53
TBC1D3BA6NDS4 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
TBC1D3BA6NDS4 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC24.62■■□□□ 1.53
TBC1D3BA6NDS4 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
TBC1D3BA6NDS4 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
TBC1D3BA6NDS4 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC24.62■■□□□ 1.53
TBC1D3BA6NDS4 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC24.62■■□□□ 1.53
TBC1D3BA6NDS4 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
TBC1D3BA6NDS4 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
TBC1D3BA6NDS4 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC24.61■■□□□ 1.53
TBC1D3BA6NDS4 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
TBC1D3BA6NDS4 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC24.61■■□□□ 1.53
TBC1D3BA6NDS4 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC24.61■■□□□ 1.53
TBC1D3BA6NDS4 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
TBC1D3BA6NDS4 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
TBC1D3BA6NDS4 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC24.6■■□□□ 1.53
TBC1D3BA6NDS4 GUSBP5-201ENST00000418136 578 ntBASIC24.6■■□□□ 1.53
TBC1D3BA6NDS4 RNF146-205ENST00000477776 762 ntTSL 3 BASIC24.6■■□□□ 1.53
TBC1D3BA6NDS4 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
TBC1D3BA6NDS4 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
TBC1D3BA6NDS4 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC24.59■■□□□ 1.53
TBC1D3BA6NDS4 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
TBC1D3BA6NDS4 TK2-216ENST00000564917 1156 ntTSL 3 BASIC24.59■■□□□ 1.53
TBC1D3BA6NDS4 AC142086.6-201ENST00000621154 1765 ntBASIC24.59■■□□□ 1.53
TBC1D3BA6NDS4 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC24.58■■□□□ 1.53
TBC1D3BA6NDS4 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC24.57■■□□□ 1.52
TBC1D3BA6NDS4 AC239859.2-201ENST00000444165 318 ntBASIC24.57■■□□□ 1.52
TBC1D3BA6NDS4 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
TBC1D3BA6NDS4 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
TBC1D3BA6NDS4 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC24.56■■□□□ 1.52
TBC1D3BA6NDS4 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC24.56■■□□□ 1.52
TBC1D3BA6NDS4 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC24.56■■□□□ 1.52
TBC1D3BA6NDS4 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC24.56■■□□□ 1.52
TBC1D3BA6NDS4 AC022616.5-201ENST00000518796 181 ntBASIC24.56■■□□□ 1.52
TBC1D3BA6NDS4 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC24.56■■□□□ 1.52
TBC1D3BA6NDS4 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC24.56■■□□□ 1.52
TBC1D3BA6NDS4 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC24.56■■□□□ 1.52
TBC1D3BA6NDS4 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC24.55■■□□□ 1.52
TBC1D3BA6NDS4 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC24.55■■□□□ 1.52
TBC1D3BA6NDS4 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC24.55■■□□□ 1.52
TBC1D3BA6NDS4 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC24.55■■□□□ 1.52
TBC1D3BA6NDS4 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC24.54■■□□□ 1.52
TBC1D3BA6NDS4 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
TBC1D3BA6NDS4 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
TBC1D3BA6NDS4 AC131212.1-201ENST00000613771 668 ntBASIC24.54■■□□□ 1.52
TBC1D3BA6NDS4 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
TBC1D3BA6NDS4 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC24.54■■□□□ 1.52
TBC1D3BA6NDS4 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
TBC1D3BA6NDS4 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC24.53■■□□□ 1.52
TBC1D3BA6NDS4 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC24.53■■□□□ 1.52
TBC1D3BA6NDS4 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
TBC1D3BA6NDS4 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC24.53■■□□□ 1.52
TBC1D3BA6NDS4 SHF-208ENST00000560734 1731 ntTSL 3 BASIC24.52■■□□□ 1.52
TBC1D3BA6NDS4 SHF-206ENST00000560471 2499 ntTSL 5 BASIC24.52■■□□□ 1.52
TBC1D3BA6NDS4 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC24.52■■□□□ 1.52
TBC1D3BA6NDS4 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
TBC1D3BA6NDS4 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC24.52■■□□□ 1.52
TBC1D3BA6NDS4 THA1P-201ENST00000590384 1145 ntBASIC24.52■■□□□ 1.52
TBC1D3BA6NDS4 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
TBC1D3BA6NDS4 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
TBC1D3BA6NDS4 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
TBC1D3BA6NDS4 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
TBC1D3BA6NDS4 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC24.51■■□□□ 1.51
TBC1D3BA6NDS4 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
TBC1D3BA6NDS4 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
TBC1D3BA6NDS4 Z92544.1-202ENST00000571933 1220 ntBASIC24.5■■□□□ 1.51
TBC1D3BA6NDS4 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC24.5■■□□□ 1.51
TBC1D3BA6NDS4 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
TBC1D3BA6NDS4 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
TBC1D3BA6NDS4 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC24.5■■□□□ 1.51
TBC1D3BA6NDS4 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC24.5■■□□□ 1.51
TBC1D3BA6NDS4 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
TBC1D3BA6NDS4 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
TBC1D3BA6NDS4 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC24.49■■□□□ 1.51
TBC1D3BA6NDS4 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
TBC1D3BA6NDS4 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC24.49■■□□□ 1.51
TBC1D3BA6NDS4 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
TBC1D3BA6NDS4 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC24.48■■□□□ 1.51
TBC1D3BA6NDS4 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC24.48■■□□□ 1.51
TBC1D3BA6NDS4 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC24.48■■□□□ 1.51
TBC1D3BA6NDS4 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC24.47■■□□□ 1.51
TBC1D3BA6NDS4 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
TBC1D3BA6NDS4 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
TBC1D3BA6NDS4 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC24.47■■□□□ 1.51
TBC1D3BA6NDS4 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
TBC1D3BA6NDS4 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
TBC1D3BA6NDS4 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
TBC1D3BA6NDS4 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC24.46■■□□□ 1.51
TBC1D3BA6NDS4 AL592295.1-201ENST00000400984 884 ntBASIC24.46■■□□□ 1.51
TBC1D3BA6NDS4 AL356441.2-201ENST00000443009 864 ntBASIC24.46■■□□□ 1.51
TBC1D3BA6NDS4 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
TBC1D3BA6NDS4 KRT18P24-201ENST00000344739 1156 ntBASIC24.45■■□□□ 1.5
TBC1D3BA6NDS4 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC24.45■■□□□ 1.5
TBC1D3BA6NDS4 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC24.45■■□□□ 1.5
TBC1D3BA6NDS4 KRT125P-201ENST00000546827 989 ntBASIC24.45■■□□□ 1.5
TBC1D3BA6NDS4 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC24.44■■□□□ 1.5
TBC1D3BA6NDS4 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
TBC1D3BA6NDS4 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
TBC1D3BA6NDS4 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC24.43■■□□□ 1.5
TBC1D3BA6NDS4 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC24.43■■□□□ 1.5
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms