Protein–RNA interactions for Protein: A6H584

Col6a5, Collagen alpha-5(VI) chain, mousemouse

Predictions only

Length 2,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a5A6H584 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Col6a5A6H584 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Col6a5A6H584 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Col6a5A6H584 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC17.04■□□□□ 0.32
Col6a5A6H584 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Col6a5A6H584 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Col6a5A6H584 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC17.04■□□□□ 0.32
Col6a5A6H584 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Col6a5A6H584 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Col6a5A6H584 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC17.03■□□□□ 0.32
Col6a5A6H584 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Col6a5A6H584 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Col6a5A6H584 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Col6a5A6H584 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC17.02■□□□□ 0.32
Col6a5A6H584 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
Col6a5A6H584 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Col6a5A6H584 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Col6a5A6H584 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Col6a5A6H584 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC17.02■□□□□ 0.32
Col6a5A6H584 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Col6a5A6H584 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Col6a5A6H584 Gm7291-201ENSMUST00000199147 382 ntBASIC17.01■□□□□ 0.31
Col6a5A6H584 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Col6a5A6H584 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC17.01■□□□□ 0.31
Col6a5A6H584 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Col6a5A6H584 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Col6a5A6H584 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Col6a5A6H584 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC17■□□□□ 0.31
Col6a5A6H584 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Col6a5A6H584 Gm28536-201ENSMUST00000190971 1317 ntBASIC17■□□□□ 0.31
Col6a5A6H584 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC17■□□□□ 0.31
Col6a5A6H584 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Col6a5A6H584 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Col6a5A6H584 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC17■□□□□ 0.31
Col6a5A6H584 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC17■□□□□ 0.31
Col6a5A6H584 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC17■□□□□ 0.31
Col6a5A6H584 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Col6a5A6H584 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC17■□□□□ 0.31
Col6a5A6H584 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC17■□□□□ 0.31
Col6a5A6H584 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Col6a5A6H584 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Col6a5A6H584 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Col6a5A6H584 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Col6a5A6H584 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Col6a5A6H584 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Col6a5A6H584 Gm10849-201ENSMUST00000100397 618 ntBASIC16.99■□□□□ 0.31
Col6a5A6H584 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Col6a5A6H584 Gm4419-202ENSMUST00000226239 1431 ntBASIC16.98■□□□□ 0.31
Col6a5A6H584 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Col6a5A6H584 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Col6a5A6H584 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC16.98■□□□□ 0.31
Col6a5A6H584 Gm27405-201ENSMUST00000184201 112 ntBASIC16.97■□□□□ 0.31
Col6a5A6H584 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Col6a5A6H584 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Col6a5A6H584 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC16.97■□□□□ 0.31
Col6a5A6H584 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Col6a5A6H584 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Col6a5A6H584 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC16.96■□□□□ 0.31
Col6a5A6H584 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Col6a5A6H584 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC16.96■□□□□ 0.31
Col6a5A6H584 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC16.96■□□□□ 0.31
Col6a5A6H584 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Col6a5A6H584 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC16.96■□□□□ 0.31
Col6a5A6H584 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Col6a5A6H584 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Col6a5A6H584 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC16.96■□□□□ 0.3
Col6a5A6H584 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Col6a5A6H584 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC16.95■□□□□ 0.3
Col6a5A6H584 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
Col6a5A6H584 Gm26571-201ENSMUST00000181399 666 ntBASIC16.95■□□□□ 0.3
Col6a5A6H584 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Col6a5A6H584 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Col6a5A6H584 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Col6a5A6H584 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Col6a5A6H584 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Col6a5A6H584 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Col6a5A6H584 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Col6a5A6H584 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Col6a5A6H584 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Col6a5A6H584 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC16.94■□□□□ 0.3
Col6a5A6H584 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Col6a5A6H584 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
Col6a5A6H584 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Col6a5A6H584 Gm10399-202ENSMUST00000202768 748 ntBASIC16.94■□□□□ 0.3
Col6a5A6H584 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Col6a5A6H584 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Col6a5A6H584 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC16.93■□□□□ 0.3
Col6a5A6H584 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Col6a5A6H584 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC16.93■□□□□ 0.3
Col6a5A6H584 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC16.93■□□□□ 0.3
Col6a5A6H584 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Col6a5A6H584 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC16.92■□□□□ 0.3
Col6a5A6H584 Spcs1-204ENSMUST00000226782 949 ntBASIC16.92■□□□□ 0.3
Col6a5A6H584 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Col6a5A6H584 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Col6a5A6H584 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Col6a5A6H584 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC16.92■□□□□ 0.3
Col6a5A6H584 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Col6a5A6H584 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Col6a5A6H584 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 88.6 ms