Protein–RNA interactions for Protein: A0A1B0GSK3

Lnp1, Leukemia NUP98 fusion partner 1, mousemouse

Predictions only

Length 178 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lnp1A0A1B0GSK3 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Lnp1A0A1B0GSK3 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Lnp1A0A1B0GSK3 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Lnp1A0A1B0GSK3 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC18.08■□□□□ 0.48
Lnp1A0A1B0GSK3 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Lnp1A0A1B0GSK3 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Lnp1A0A1B0GSK3 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
Lnp1A0A1B0GSK3 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC18.07■□□□□ 0.48
Lnp1A0A1B0GSK3 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC18.07■□□□□ 0.48
Lnp1A0A1B0GSK3 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Lnp1A0A1B0GSK3 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Lnp1A0A1B0GSK3 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC18.07■□□□□ 0.48
Lnp1A0A1B0GSK3 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Lnp1A0A1B0GSK3 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Lnp1A0A1B0GSK3 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Lnp1A0A1B0GSK3 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Lnp1A0A1B0GSK3 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Lnp1A0A1B0GSK3 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
Lnp1A0A1B0GSK3 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Lnp1A0A1B0GSK3 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Lnp1A0A1B0GSK3 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Lnp1A0A1B0GSK3 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Lnp1A0A1B0GSK3 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Lnp1A0A1B0GSK3 Mir6538-201ENSMUST00000183713 110 ntBASIC18.06■□□□□ 0.48
Lnp1A0A1B0GSK3 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Lnp1A0A1B0GSK3 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Lnp1A0A1B0GSK3 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Lnp1A0A1B0GSK3 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Lnp1A0A1B0GSK3 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC18.05■□□□□ 0.48
Lnp1A0A1B0GSK3 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC18.05■□□□□ 0.48
Lnp1A0A1B0GSK3 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC18.05■□□□□ 0.48
Lnp1A0A1B0GSK3 AC117245.4-201ENSMUST00000217388 1646 ntBASIC18.05■□□□□ 0.48
Lnp1A0A1B0GSK3 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Lnp1A0A1B0GSK3 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Lnp1A0A1B0GSK3 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Lnp1A0A1B0GSK3 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
Lnp1A0A1B0GSK3 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Lnp1A0A1B0GSK3 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Lnp1A0A1B0GSK3 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Lnp1A0A1B0GSK3 Gm17641-201ENSMUST00000166328 2350 ntBASIC18.03■□□□□ 0.48
Lnp1A0A1B0GSK3 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Lnp1A0A1B0GSK3 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
Lnp1A0A1B0GSK3 Gm14523-201ENSMUST00000117260 558 ntBASIC18.03■□□□□ 0.48
Lnp1A0A1B0GSK3 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Lnp1A0A1B0GSK3 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC18.03■□□□□ 0.48
Lnp1A0A1B0GSK3 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Lnp1A0A1B0GSK3 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Lnp1A0A1B0GSK3 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Lnp1A0A1B0GSK3 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Lnp1A0A1B0GSK3 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Lnp1A0A1B0GSK3 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC18.02■□□□□ 0.48
Lnp1A0A1B0GSK3 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.47
Lnp1A0A1B0GSK3 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Lnp1A0A1B0GSK3 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Lnp1A0A1B0GSK3 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Lnp1A0A1B0GSK3 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Lnp1A0A1B0GSK3 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Lnp1A0A1B0GSK3 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC18■□□□□ 0.47
Lnp1A0A1B0GSK3 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
Lnp1A0A1B0GSK3 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC18■□□□□ 0.47
Lnp1A0A1B0GSK3 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC18■□□□□ 0.47
Lnp1A0A1B0GSK3 Gm7332-201ENSMUST00000118351 454 ntBASIC18■□□□□ 0.47
Lnp1A0A1B0GSK3 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC18■□□□□ 0.47
Lnp1A0A1B0GSK3 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Lnp1A0A1B0GSK3 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Lnp1A0A1B0GSK3 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Lnp1A0A1B0GSK3 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Lnp1A0A1B0GSK3 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Lnp1A0A1B0GSK3 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Lnp1A0A1B0GSK3 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC17.99■□□□□ 0.47
Lnp1A0A1B0GSK3 Gm12366-201ENSMUST00000121722 873 ntBASIC17.99■□□□□ 0.47
Lnp1A0A1B0GSK3 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Lnp1A0A1B0GSK3 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC17.99■□□□□ 0.47
Lnp1A0A1B0GSK3 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Lnp1A0A1B0GSK3 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC17.99■□□□□ 0.47
Lnp1A0A1B0GSK3 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Lnp1A0A1B0GSK3 Gm5786-201ENSMUST00000085368 882 ntBASIC17.99■□□□□ 0.47
Lnp1A0A1B0GSK3 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Lnp1A0A1B0GSK3 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC17.99■□□□□ 0.47
Lnp1A0A1B0GSK3 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC17.98■□□□□ 0.47
Lnp1A0A1B0GSK3 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Lnp1A0A1B0GSK3 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Lnp1A0A1B0GSK3 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC17.98■□□□□ 0.47
Lnp1A0A1B0GSK3 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Lnp1A0A1B0GSK3 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Lnp1A0A1B0GSK3 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Lnp1A0A1B0GSK3 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Lnp1A0A1B0GSK3 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Lnp1A0A1B0GSK3 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Lnp1A0A1B0GSK3 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Lnp1A0A1B0GSK3 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Lnp1A0A1B0GSK3 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Lnp1A0A1B0GSK3 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC17.97■□□□□ 0.47
Lnp1A0A1B0GSK3 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC17.97■□□□□ 0.47
Lnp1A0A1B0GSK3 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Lnp1A0A1B0GSK3 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Lnp1A0A1B0GSK3 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
Lnp1A0A1B0GSK3 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Lnp1A0A1B0GSK3 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Lnp1A0A1B0GSK3 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 47.4 ms