Protein–RNA interactions for Protein: A0A0B4J241

TRAV13-1, T-cell receptor alpha variable 13-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV13-1A0A0B4J241 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC16.57■□□□□ 0.24
TRAV13-1A0A0B4J241 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC16.57■□□□□ 0.24
TRAV13-1A0A0B4J241 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC16.57■□□□□ 0.24
TRAV13-1A0A0B4J241 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRAV13-1A0A0B4J241 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC16.57■□□□□ 0.24
TRAV13-1A0A0B4J241 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRAV13-1A0A0B4J241 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC16.56■□□□□ 0.24
TRAV13-1A0A0B4J241 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC16.56■□□□□ 0.24
TRAV13-1A0A0B4J241 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
TRAV13-1A0A0B4J241 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
TRAV13-1A0A0B4J241 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC16.56■□□□□ 0.24
TRAV13-1A0A0B4J241 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC16.56■□□□□ 0.24
TRAV13-1A0A0B4J241 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
TRAV13-1A0A0B4J241 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRAV13-1A0A0B4J241 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
TRAV13-1A0A0B4J241 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRAV13-1A0A0B4J241 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TRAV13-1A0A0B4J241 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC16.55■□□□□ 0.24
TRAV13-1A0A0B4J241 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRAV13-1A0A0B4J241 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
TRAV13-1A0A0B4J241 CHML-204ENST00000638121 920 ntTSL 2 BASIC16.55■□□□□ 0.24
TRAV13-1A0A0B4J241 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRAV13-1A0A0B4J241 THRA-202ENST00000394121 2260 ntTSL 2 BASIC16.55■□□□□ 0.24
TRAV13-1A0A0B4J241 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TRAV13-1A0A0B4J241 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRAV13-1A0A0B4J241 AC138932.3-201ENST00000567634 1902 ntBASIC16.55■□□□□ 0.24
TRAV13-1A0A0B4J241 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRAV13-1A0A0B4J241 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TRAV13-1A0A0B4J241 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC16.54■□□□□ 0.24
TRAV13-1A0A0B4J241 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
TRAV13-1A0A0B4J241 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRAV13-1A0A0B4J241 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
TRAV13-1A0A0B4J241 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TRAV13-1A0A0B4J241 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC16.54■□□□□ 0.24
TRAV13-1A0A0B4J241 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC16.54■□□□□ 0.24
TRAV13-1A0A0B4J241 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TRAV13-1A0A0B4J241 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRAV13-1A0A0B4J241 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC16.53■□□□□ 0.24
TRAV13-1A0A0B4J241 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRAV13-1A0A0B4J241 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRAV13-1A0A0B4J241 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRAV13-1A0A0B4J241 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRAV13-1A0A0B4J241 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC16.53■□□□□ 0.24
TRAV13-1A0A0B4J241 CHST11-202ENST00000546689 756 ntTSL 2 BASIC16.53■□□□□ 0.24
TRAV13-1A0A0B4J241 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRAV13-1A0A0B4J241 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRAV13-1A0A0B4J241 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRAV13-1A0A0B4J241 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC16.53■□□□□ 0.24
TRAV13-1A0A0B4J241 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
TRAV13-1A0A0B4J241 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TRAV13-1A0A0B4J241 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
TRAV13-1A0A0B4J241 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.24
TRAV13-1A0A0B4J241 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC16.52■□□□□ 0.24
TRAV13-1A0A0B4J241 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TRAV13-1A0A0B4J241 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
TRAV13-1A0A0B4J241 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC16.52■□□□□ 0.23
TRAV13-1A0A0B4J241 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRAV13-1A0A0B4J241 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
TRAV13-1A0A0B4J241 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRAV13-1A0A0B4J241 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
TRAV13-1A0A0B4J241 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRAV13-1A0A0B4J241 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC16.51■□□□□ 0.23
TRAV13-1A0A0B4J241 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRAV13-1A0A0B4J241 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
TRAV13-1A0A0B4J241 AC096887.2-201ENST00000623443 1957 ntBASIC16.51■□□□□ 0.23
TRAV13-1A0A0B4J241 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRAV13-1A0A0B4J241 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRAV13-1A0A0B4J241 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
TRAV13-1A0A0B4J241 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
TRAV13-1A0A0B4J241 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRAV13-1A0A0B4J241 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC16.5■□□□□ 0.23
TRAV13-1A0A0B4J241 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC16.5■□□□□ 0.23
TRAV13-1A0A0B4J241 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC16.5■□□□□ 0.23
TRAV13-1A0A0B4J241 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRAV13-1A0A0B4J241 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
TRAV13-1A0A0B4J241 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRAV13-1A0A0B4J241 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRAV13-1A0A0B4J241 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRAV13-1A0A0B4J241 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRAV13-1A0A0B4J241 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRAV13-1A0A0B4J241 AC008813.1-201ENST00000536597 885 ntBASIC16.49■□□□□ 0.23
TRAV13-1A0A0B4J241 LINC01971-201ENST00000617888 1048 ntBASIC16.49■□□□□ 0.23
TRAV13-1A0A0B4J241 AL139125.2-201ENST00000623134 1869 ntBASIC16.49■□□□□ 0.23
TRAV13-1A0A0B4J241 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TRAV13-1A0A0B4J241 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRAV13-1A0A0B4J241 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRAV13-1A0A0B4J241 MIR219A2-201ENST00000608502 1504 ntBASIC16.49■□□□□ 0.23
TRAV13-1A0A0B4J241 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
TRAV13-1A0A0B4J241 PKD1P6-201ENST00000343738 4769 ntBASIC16.48■□□□□ 0.23
TRAV13-1A0A0B4J241 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRAV13-1A0A0B4J241 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRAV13-1A0A0B4J241 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRAV13-1A0A0B4J241 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRAV13-1A0A0B4J241 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRAV13-1A0A0B4J241 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC16.48■□□□□ 0.23
TRAV13-1A0A0B4J241 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRAV13-1A0A0B4J241 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRAV13-1A0A0B4J241 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC16.47■□□□□ 0.23
TRAV13-1A0A0B4J241 AL359258.2-201ENST00000564063 1566 ntBASIC16.47■□□□□ 0.23
TRAV13-1A0A0B4J241 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms