Protein–RNA interactions for Protein: A0A0B4J237

TRAV8-2, T-cell receptor alpha variable 8-2 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-2A0A0B4J237 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRAV8-2A0A0B4J237 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRAV8-2A0A0B4J237 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRAV8-2A0A0B4J237 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
TRAV8-2A0A0B4J237 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRAV8-2A0A0B4J237 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRAV8-2A0A0B4J237 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC18.17■□□□□ 0.5
TRAV8-2A0A0B4J237 MIR7108-201ENST00000614319 87 ntBASIC18.17■□□□□ 0.5
TRAV8-2A0A0B4J237 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC18.17■□□□□ 0.5
TRAV8-2A0A0B4J237 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TRAV8-2A0A0B4J237 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRAV8-2A0A0B4J237 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TRAV8-2A0A0B4J237 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
TRAV8-2A0A0B4J237 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC18.16■□□□□ 0.5
TRAV8-2A0A0B4J237 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC18.16■□□□□ 0.5
TRAV8-2A0A0B4J237 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
TRAV8-2A0A0B4J237 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
TRAV8-2A0A0B4J237 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
TRAV8-2A0A0B4J237 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
TRAV8-2A0A0B4J237 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRAV8-2A0A0B4J237 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC18.15■□□□□ 0.5
TRAV8-2A0A0B4J237 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
TRAV8-2A0A0B4J237 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC18.15■□□□□ 0.5
TRAV8-2A0A0B4J237 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRAV8-2A0A0B4J237 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC18.15■□□□□ 0.5
TRAV8-2A0A0B4J237 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRAV8-2A0A0B4J237 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRAV8-2A0A0B4J237 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC18.15■□□□□ 0.5
TRAV8-2A0A0B4J237 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
TRAV8-2A0A0B4J237 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
TRAV8-2A0A0B4J237 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC18.15■□□□□ 0.5
TRAV8-2A0A0B4J237 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC18.15■□□□□ 0.5
TRAV8-2A0A0B4J237 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRAV8-2A0A0B4J237 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRAV8-2A0A0B4J237 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRAV8-2A0A0B4J237 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRAV8-2A0A0B4J237 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
TRAV8-2A0A0B4J237 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC18.14■□□□□ 0.49
TRAV8-2A0A0B4J237 AL157400.5-201ENST00000507624 621 ntBASIC18.14■□□□□ 0.49
TRAV8-2A0A0B4J237 AC142381.3-201ENST00000568208 1670 ntBASIC18.14■□□□□ 0.49
TRAV8-2A0A0B4J237 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRAV8-2A0A0B4J237 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRAV8-2A0A0B4J237 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRAV8-2A0A0B4J237 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRAV8-2A0A0B4J237 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
TRAV8-2A0A0B4J237 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRAV8-2A0A0B4J237 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC18.13■□□□□ 0.49
TRAV8-2A0A0B4J237 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
TRAV8-2A0A0B4J237 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
TRAV8-2A0A0B4J237 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC18.12■□□□□ 0.49
TRAV8-2A0A0B4J237 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
TRAV8-2A0A0B4J237 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC18.12■□□□□ 0.49
TRAV8-2A0A0B4J237 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TRAV8-2A0A0B4J237 MED17-227ENST00000640521 2047 ntTSL 5 BASIC18.12■□□□□ 0.49
TRAV8-2A0A0B4J237 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
TRAV8-2A0A0B4J237 AC060814.1-201ENST00000554326 538 ntBASIC18.12■□□□□ 0.49
TRAV8-2A0A0B4J237 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
TRAV8-2A0A0B4J237 AC022211.4-201ENST00000625094 2161 ntBASIC18.12■□□□□ 0.49
TRAV8-2A0A0B4J237 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TRAV8-2A0A0B4J237 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TRAV8-2A0A0B4J237 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRAV8-2A0A0B4J237 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRAV8-2A0A0B4J237 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
TRAV8-2A0A0B4J237 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
TRAV8-2A0A0B4J237 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRAV8-2A0A0B4J237 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
TRAV8-2A0A0B4J237 PVT1-219ENST00000523427 938 ntTSL 3 BASIC18.11■□□□□ 0.49
TRAV8-2A0A0B4J237 MOB2-207ENST00000614710 705 ntTSL 5 BASIC18.11■□□□□ 0.49
TRAV8-2A0A0B4J237 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
TRAV8-2A0A0B4J237 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
TRAV8-2A0A0B4J237 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRAV8-2A0A0B4J237 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRAV8-2A0A0B4J237 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRAV8-2A0A0B4J237 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRAV8-2A0A0B4J237 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
TRAV8-2A0A0B4J237 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRAV8-2A0A0B4J237 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRAV8-2A0A0B4J237 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC18.1■□□□□ 0.49
TRAV8-2A0A0B4J237 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRAV8-2A0A0B4J237 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRAV8-2A0A0B4J237 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRAV8-2A0A0B4J237 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRAV8-2A0A0B4J237 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
TRAV8-2A0A0B4J237 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC18.09■□□□□ 0.49
TRAV8-2A0A0B4J237 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRAV8-2A0A0B4J237 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC18.09■□□□□ 0.49
TRAV8-2A0A0B4J237 MIR639-201ENST00000384974 98 ntBASIC18.09■□□□□ 0.49
TRAV8-2A0A0B4J237 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
TRAV8-2A0A0B4J237 RPS2-202ENST00000526522 924 ntTSL 2 BASIC18.09■□□□□ 0.49
TRAV8-2A0A0B4J237 AC025884.2-201ENST00000553429 711 ntBASIC18.09■□□□□ 0.49
TRAV8-2A0A0B4J237 AC138932.3-201ENST00000567634 1902 ntBASIC18.09■□□□□ 0.49
TRAV8-2A0A0B4J237 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC18.09■□□□□ 0.49
TRAV8-2A0A0B4J237 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
TRAV8-2A0A0B4J237 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
TRAV8-2A0A0B4J237 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
TRAV8-2A0A0B4J237 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC18.08■□□□□ 0.49
TRAV8-2A0A0B4J237 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
TRAV8-2A0A0B4J237 PKM-204ENST00000449901 2526 ntTSL 2 BASIC18.08■□□□□ 0.49
TRAV8-2A0A0B4J237 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC18.08■□□□□ 0.48
TRAV8-2A0A0B4J237 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 116.9 ms