Protein–RNA interactions for Protein: A0A0B4J1J8

Tcrg-V4, T cell receptor gamma, variable 4 (Fragment), mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tcrg-V4A0A0B4J1J8 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Tcrg-V4A0A0B4J1J8 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Tcrg-V4A0A0B4J1J8 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Tcrg-V4A0A0B4J1J8 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Tcrg-V4A0A0B4J1J8 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Tcrg-V4A0A0B4J1J8 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Tcrg-V4A0A0B4J1J8 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Tcrg-V4A0A0B4J1J8 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Tcrg-V4A0A0B4J1J8 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Tcrg-V4A0A0B4J1J8 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Tcrg-V4A0A0B4J1J8 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Tcrg-V4A0A0B4J1J8 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Tcrg-V4A0A0B4J1J8 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Tcrg-V4A0A0B4J1J8 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Tcrg-V4A0A0B4J1J8 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Tcrg-V4A0A0B4J1J8 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Tcrg-V4A0A0B4J1J8 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC16.31■□□□□ 0.2
Tcrg-V4A0A0B4J1J8 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Tcrg-V4A0A0B4J1J8 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Tcrg-V4A0A0B4J1J8 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC16.31■□□□□ 0.2
Tcrg-V4A0A0B4J1J8 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC16.31■□□□□ 0.2
Tcrg-V4A0A0B4J1J8 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Tcrg-V4A0A0B4J1J8 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Tcrg-V4A0A0B4J1J8 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Tcrg-V4A0A0B4J1J8 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Tcrg-V4A0A0B4J1J8 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Tcrg-V4A0A0B4J1J8 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Tcrg-V4A0A0B4J1J8 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tcrg-V4A0A0B4J1J8 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tcrg-V4A0A0B4J1J8 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tcrg-V4A0A0B4J1J8 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tcrg-V4A0A0B4J1J8 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tcrg-V4A0A0B4J1J8 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tcrg-V4A0A0B4J1J8 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC16.3■□□□□ 0.2
Tcrg-V4A0A0B4J1J8 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tcrg-V4A0A0B4J1J8 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Tcrg-V4A0A0B4J1J8 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Tcrg-V4A0A0B4J1J8 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Tcrg-V4A0A0B4J1J8 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Tcrg-V4A0A0B4J1J8 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Tcrg-V4A0A0B4J1J8 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Tcrg-V4A0A0B4J1J8 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC16.29■□□□□ 0.2
Tcrg-V4A0A0B4J1J8 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Tcrg-V4A0A0B4J1J8 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC16.29■□□□□ 0.2
Tcrg-V4A0A0B4J1J8 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC16.29■□□□□ 0.2
Tcrg-V4A0A0B4J1J8 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC16.29■□□□□ 0.2
Tcrg-V4A0A0B4J1J8 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Tcrg-V4A0A0B4J1J8 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Tcrg-V4A0A0B4J1J8 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Tcrg-V4A0A0B4J1J8 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Tcrg-V4A0A0B4J1J8 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Tcrg-V4A0A0B4J1J8 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Tcrg-V4A0A0B4J1J8 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Tcrg-V4A0A0B4J1J8 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Tcrg-V4A0A0B4J1J8 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Tcrg-V4A0A0B4J1J8 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC16.28■□□□□ 0.2
Tcrg-V4A0A0B4J1J8 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Tcrg-V4A0A0B4J1J8 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
Tcrg-V4A0A0B4J1J8 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Tcrg-V4A0A0B4J1J8 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Tcrg-V4A0A0B4J1J8 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Tcrg-V4A0A0B4J1J8 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC16.26■□□□□ 0.19
Tcrg-V4A0A0B4J1J8 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Tcrg-V4A0A0B4J1J8 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Tcrg-V4A0A0B4J1J8 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Tcrg-V4A0A0B4J1J8 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Tcrg-V4A0A0B4J1J8 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC16.26■□□□□ 0.19
Tcrg-V4A0A0B4J1J8 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Tcrg-V4A0A0B4J1J8 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Tcrg-V4A0A0B4J1J8 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Tcrg-V4A0A0B4J1J8 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Tcrg-V4A0A0B4J1J8 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Tcrg-V4A0A0B4J1J8 Golph3-202ENSMUST00000226517 2359 ntBASIC16.25■□□□□ 0.19
Tcrg-V4A0A0B4J1J8 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Tcrg-V4A0A0B4J1J8 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Tcrg-V4A0A0B4J1J8 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Tcrg-V4A0A0B4J1J8 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC16.24■□□□□ 0.19
Tcrg-V4A0A0B4J1J8 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Tcrg-V4A0A0B4J1J8 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC16.24■□□□□ 0.19
Tcrg-V4A0A0B4J1J8 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Tcrg-V4A0A0B4J1J8 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC16.24■□□□□ 0.19
Tcrg-V4A0A0B4J1J8 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Tcrg-V4A0A0B4J1J8 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Tcrg-V4A0A0B4J1J8 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Tcrg-V4A0A0B4J1J8 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Tcrg-V4A0A0B4J1J8 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Tcrg-V4A0A0B4J1J8 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Tcrg-V4A0A0B4J1J8 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Tcrg-V4A0A0B4J1J8 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Tcrg-V4A0A0B4J1J8 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Tcrg-V4A0A0B4J1J8 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Tcrg-V4A0A0B4J1J8 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Tcrg-V4A0A0B4J1J8 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Tcrg-V4A0A0B4J1J8 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Tcrg-V4A0A0B4J1J8 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Tcrg-V4A0A0B4J1J8 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC16.22■□□□□ 0.19
Tcrg-V4A0A0B4J1J8 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Tcrg-V4A0A0B4J1J8 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Tcrg-V4A0A0B4J1J8 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Tcrg-V4A0A0B4J1J8 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms