Protein–RNA interactions for Protein: A0A0A6YY38

Ighv1-42, Immunoglobulin heavy variable V1-42 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-42A0A0A6YY38 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ighv1-42A0A0A6YY38 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ighv1-42A0A0A6YY38 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC20.31■□□□□ 0.84
Ighv1-42A0A0A6YY38 AC117245.4-201ENSMUST00000217388 1646 ntBASIC20.31■□□□□ 0.84
Ighv1-42A0A0A6YY38 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ighv1-42A0A0A6YY38 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC20.3■□□□□ 0.84
Ighv1-42A0A0A6YY38 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC20.3■□□□□ 0.84
Ighv1-42A0A0A6YY38 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ighv1-42A0A0A6YY38 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
Ighv1-42A0A0A6YY38 AC153890.1-201ENSMUST00000220021 2469 ntBASIC20.3■□□□□ 0.84
Ighv1-42A0A0A6YY38 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ighv1-42A0A0A6YY38 Gm28731-201ENSMUST00000185564 1569 ntBASIC20.29■□□□□ 0.84
Ighv1-42A0A0A6YY38 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Ighv1-42A0A0A6YY38 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Ighv1-42A0A0A6YY38 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC20.29■□□□□ 0.84
Ighv1-42A0A0A6YY38 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ighv1-42A0A0A6YY38 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ighv1-42A0A0A6YY38 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ighv1-42A0A0A6YY38 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ighv1-42A0A0A6YY38 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC20.28■□□□□ 0.84
Ighv1-42A0A0A6YY38 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ighv1-42A0A0A6YY38 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ighv1-42A0A0A6YY38 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ighv1-42A0A0A6YY38 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ighv1-42A0A0A6YY38 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Ighv1-42A0A0A6YY38 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC20.27■□□□□ 0.84
Ighv1-42A0A0A6YY38 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ighv1-42A0A0A6YY38 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Ighv1-42A0A0A6YY38 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Ighv1-42A0A0A6YY38 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ighv1-42A0A0A6YY38 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ighv1-42A0A0A6YY38 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC20.26■□□□□ 0.83
Ighv1-42A0A0A6YY38 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC20.26■□□□□ 0.83
Ighv1-42A0A0A6YY38 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ighv1-42A0A0A6YY38 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Ighv1-42A0A0A6YY38 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Ighv1-42A0A0A6YY38 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Ighv1-42A0A0A6YY38 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Ighv1-42A0A0A6YY38 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Ighv1-42A0A0A6YY38 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ighv1-42A0A0A6YY38 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC20.24■□□□□ 0.83
Ighv1-42A0A0A6YY38 Etf1-202ENSMUST00000180351 108 ntBASIC20.24■□□□□ 0.83
Ighv1-42A0A0A6YY38 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC20.24■□□□□ 0.83
Ighv1-42A0A0A6YY38 Gm28536-201ENSMUST00000190971 1317 ntBASIC20.24■□□□□ 0.83
Ighv1-42A0A0A6YY38 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Ighv1-42A0A0A6YY38 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
Ighv1-42A0A0A6YY38 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
Ighv1-42A0A0A6YY38 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ighv1-42A0A0A6YY38 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC20.23■□□□□ 0.83
Ighv1-42A0A0A6YY38 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Ighv1-42A0A0A6YY38 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ighv1-42A0A0A6YY38 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ighv1-42A0A0A6YY38 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ighv1-42A0A0A6YY38 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ighv1-42A0A0A6YY38 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC20.22■□□□□ 0.83
Ighv1-42A0A0A6YY38 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC20.22■□□□□ 0.83
Ighv1-42A0A0A6YY38 Nsd1-206ENSMUST00000224918 1001 ntBASIC20.21■□□□□ 0.83
Ighv1-42A0A0A6YY38 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC20.21■□□□□ 0.83
Ighv1-42A0A0A6YY38 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ighv1-42A0A0A6YY38 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.83
Ighv1-42A0A0A6YY38 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ighv1-42A0A0A6YY38 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ighv1-42A0A0A6YY38 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ighv1-42A0A0A6YY38 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ighv1-42A0A0A6YY38 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Ighv1-42A0A0A6YY38 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC20.2■□□□□ 0.82
Ighv1-42A0A0A6YY38 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ighv1-42A0A0A6YY38 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ighv1-42A0A0A6YY38 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ighv1-42A0A0A6YY38 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ighv1-42A0A0A6YY38 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ighv1-42A0A0A6YY38 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ighv1-42A0A0A6YY38 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Ighv1-42A0A0A6YY38 Gm5131-201ENSMUST00000212776 1238 ntBASIC20.19■□□□□ 0.82
Ighv1-42A0A0A6YY38 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ighv1-42A0A0A6YY38 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Ighv1-42A0A0A6YY38 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ighv1-42A0A0A6YY38 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Ighv1-42A0A0A6YY38 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ighv1-42A0A0A6YY38 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ighv1-42A0A0A6YY38 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC20.18■□□□□ 0.82
Ighv1-42A0A0A6YY38 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ighv1-42A0A0A6YY38 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ighv1-42A0A0A6YY38 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ighv1-42A0A0A6YY38 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Ighv1-42A0A0A6YY38 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ighv1-42A0A0A6YY38 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC20.17■□□□□ 0.82
Ighv1-42A0A0A6YY38 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
Ighv1-42A0A0A6YY38 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Ighv1-42A0A0A6YY38 Gm6934-201ENSMUST00000194780 1905 ntBASIC20.16■□□□□ 0.82
Ighv1-42A0A0A6YY38 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
Ighv1-42A0A0A6YY38 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC20.16■□□□□ 0.82
Ighv1-42A0A0A6YY38 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC20.16■□□□□ 0.82
Ighv1-42A0A0A6YY38 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ighv1-42A0A0A6YY38 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ighv1-42A0A0A6YY38 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
Ighv1-42A0A0A6YY38 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Ighv1-42A0A0A6YY38 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC20.15■□□□□ 0.82
Ighv1-42A0A0A6YY38 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC20.15■□□□□ 0.82
Ighv1-42A0A0A6YY38 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms