Protein–RNA interactions for Protein: A0A087WSK7

Gm28778, Predicted gene 28778 (Fragment), mousemouse

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28778A0A087WSK7 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Gm28778A0A087WSK7 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Gm28778A0A087WSK7 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Gm28778A0A087WSK7 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Gm28778A0A087WSK7 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC17.7■□□□□ 0.42
Gm28778A0A087WSK7 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC17.7■□□□□ 0.42
Gm28778A0A087WSK7 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Gm28778A0A087WSK7 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Gm28778A0A087WSK7 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Gm28778A0A087WSK7 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC17.69■□□□□ 0.42
Gm28778A0A087WSK7 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Gm28778A0A087WSK7 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Gm28778A0A087WSK7 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Gm28778A0A087WSK7 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Gm28778A0A087WSK7 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Gm28778A0A087WSK7 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Gm28778A0A087WSK7 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC17.68■□□□□ 0.42
Gm28778A0A087WSK7 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Gm28778A0A087WSK7 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Gm28778A0A087WSK7 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Gm28778A0A087WSK7 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Gm28778A0A087WSK7 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Gm28778A0A087WSK7 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Gm28778A0A087WSK7 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Gm28778A0A087WSK7 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Gm28778A0A087WSK7 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Gm28778A0A087WSK7 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Gm28778A0A087WSK7 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC17.67■□□□□ 0.42
Gm28778A0A087WSK7 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Gm28778A0A087WSK7 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Gm28778A0A087WSK7 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Gm28778A0A087WSK7 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC17.67■□□□□ 0.42
Gm28778A0A087WSK7 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Gm28778A0A087WSK7 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Gm28778A0A087WSK7 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Gm28778A0A087WSK7 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC17.66■□□□□ 0.42
Gm28778A0A087WSK7 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Gm28778A0A087WSK7 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Gm28778A0A087WSK7 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Gm28778A0A087WSK7 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Gm28778A0A087WSK7 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Gm28778A0A087WSK7 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Gm28778A0A087WSK7 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Gm28778A0A087WSK7 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Gm28778A0A087WSK7 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Gm28778A0A087WSK7 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.42
Gm28778A0A087WSK7 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Gm28778A0A087WSK7 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Gm28778A0A087WSK7 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Gm28778A0A087WSK7 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Gm28778A0A087WSK7 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Gm28778A0A087WSK7 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Gm28778A0A087WSK7 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Gm28778A0A087WSK7 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Gm28778A0A087WSK7 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Gm28778A0A087WSK7 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
Gm28778A0A087WSK7 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC17.63■□□□□ 0.41
Gm28778A0A087WSK7 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Gm28778A0A087WSK7 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Gm28778A0A087WSK7 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Gm28778A0A087WSK7 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Gm28778A0A087WSK7 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Gm28778A0A087WSK7 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Gm28778A0A087WSK7 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Gm28778A0A087WSK7 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Gm28778A0A087WSK7 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Gm28778A0A087WSK7 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Gm28778A0A087WSK7 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Gm28778A0A087WSK7 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Gm28778A0A087WSK7 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC17.61■□□□□ 0.41
Gm28778A0A087WSK7 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Gm28778A0A087WSK7 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Gm28778A0A087WSK7 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Gm28778A0A087WSK7 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Gm28778A0A087WSK7 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Gm28778A0A087WSK7 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC17.6■□□□□ 0.41
Gm28778A0A087WSK7 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Gm28778A0A087WSK7 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Gm28778A0A087WSK7 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC17.6■□□□□ 0.41
Gm28778A0A087WSK7 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Gm28778A0A087WSK7 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Gm28778A0A087WSK7 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Gm28778A0A087WSK7 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Gm28778A0A087WSK7 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Gm28778A0A087WSK7 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Gm28778A0A087WSK7 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC17.59■□□□□ 0.41
Gm28778A0A087WSK7 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Gm28778A0A087WSK7 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Gm28778A0A087WSK7 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Gm28778A0A087WSK7 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Gm28778A0A087WSK7 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Gm28778A0A087WSK7 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Gm28778A0A087WSK7 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Gm28778A0A087WSK7 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC17.59■□□□□ 0.41
Gm28778A0A087WSK7 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Gm28778A0A087WSK7 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC17.59■□□□□ 0.41
Gm28778A0A087WSK7 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC17.59■□□□□ 0.41
Gm28778A0A087WSK7 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Gm28778A0A087WSK7 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Gm28778A0A087WSK7 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC17.59■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms