Protein–RNA interactions for Protein: A0A075B6C4

Trav21-dv12, T cell receptor alpha variable 21-DV12 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav21-dv12A0A075B6C4 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Trav21-dv12A0A075B6C4 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trav21-dv12A0A075B6C4 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC16.67■□□□□ 0.26
Trav21-dv12A0A075B6C4 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trav21-dv12A0A075B6C4 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Trav21-dv12A0A075B6C4 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trav21-dv12A0A075B6C4 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Trav21-dv12A0A075B6C4 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC16.67■□□□□ 0.26
Trav21-dv12A0A075B6C4 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trav21-dv12A0A075B6C4 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Trav21-dv12A0A075B6C4 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trav21-dv12A0A075B6C4 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Trav21-dv12A0A075B6C4 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC16.66■□□□□ 0.26
Trav21-dv12A0A075B6C4 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC16.66■□□□□ 0.26
Trav21-dv12A0A075B6C4 Gm20634-201ENSMUST00000090779 2956 ntBASIC16.66■□□□□ 0.26
Trav21-dv12A0A075B6C4 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Trav21-dv12A0A075B6C4 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trav21-dv12A0A075B6C4 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trav21-dv12A0A075B6C4 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Trav21-dv12A0A075B6C4 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC16.65■□□□□ 0.26
Trav21-dv12A0A075B6C4 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trav21-dv12A0A075B6C4 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Trav21-dv12A0A075B6C4 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Trav21-dv12A0A075B6C4 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trav21-dv12A0A075B6C4 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Trav21-dv12A0A075B6C4 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trav21-dv12A0A075B6C4 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC16.64■□□□□ 0.25
Trav21-dv12A0A075B6C4 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Trav21-dv12A0A075B6C4 Scarna2-201ENSMUST00000157560 414 ntBASIC16.64■□□□□ 0.25
Trav21-dv12A0A075B6C4 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trav21-dv12A0A075B6C4 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trav21-dv12A0A075B6C4 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trav21-dv12A0A075B6C4 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Trav21-dv12A0A075B6C4 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC16.64■□□□□ 0.25
Trav21-dv12A0A075B6C4 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trav21-dv12A0A075B6C4 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Trav21-dv12A0A075B6C4 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trav21-dv12A0A075B6C4 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trav21-dv12A0A075B6C4 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trav21-dv12A0A075B6C4 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Trav21-dv12A0A075B6C4 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trav21-dv12A0A075B6C4 AC153524.1-201ENSMUST00000220436 1935 ntBASIC16.62■□□□□ 0.25
Trav21-dv12A0A075B6C4 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trav21-dv12A0A075B6C4 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trav21-dv12A0A075B6C4 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trav21-dv12A0A075B6C4 Gm16437-201ENSMUST00000025669 507 ntBASIC16.62■□□□□ 0.25
Trav21-dv12A0A075B6C4 Gm9806-201ENSMUST00000051080 552 ntBASIC16.62■□□□□ 0.25
Trav21-dv12A0A075B6C4 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trav21-dv12A0A075B6C4 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC16.62■□□□□ 0.25
Trav21-dv12A0A075B6C4 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trav21-dv12A0A075B6C4 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trav21-dv12A0A075B6C4 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trav21-dv12A0A075B6C4 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Trav21-dv12A0A075B6C4 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC16.61■□□□□ 0.25
Trav21-dv12A0A075B6C4 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trav21-dv12A0A075B6C4 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trav21-dv12A0A075B6C4 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trav21-dv12A0A075B6C4 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trav21-dv12A0A075B6C4 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Trav21-dv12A0A075B6C4 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Trav21-dv12A0A075B6C4 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trav21-dv12A0A075B6C4 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trav21-dv12A0A075B6C4 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trav21-dv12A0A075B6C4 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trav21-dv12A0A075B6C4 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trav21-dv12A0A075B6C4 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trav21-dv12A0A075B6C4 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trav21-dv12A0A075B6C4 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trav21-dv12A0A075B6C4 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Trav21-dv12A0A075B6C4 Gm44428-201ENSMUST00000204474 874 ntBASIC16.59■□□□□ 0.25
Trav21-dv12A0A075B6C4 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trav21-dv12A0A075B6C4 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Trav21-dv12A0A075B6C4 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Trav21-dv12A0A075B6C4 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Trav21-dv12A0A075B6C4 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Trav21-dv12A0A075B6C4 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trav21-dv12A0A075B6C4 Gm11687-201ENSMUST00000118911 886 ntBASIC16.58■□□□□ 0.24
Trav21-dv12A0A075B6C4 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC16.58■□□□□ 0.24
Trav21-dv12A0A075B6C4 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trav21-dv12A0A075B6C4 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trav21-dv12A0A075B6C4 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
Trav21-dv12A0A075B6C4 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trav21-dv12A0A075B6C4 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Trav21-dv12A0A075B6C4 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
Trav21-dv12A0A075B6C4 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trav21-dv12A0A075B6C4 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Trav21-dv12A0A075B6C4 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trav21-dv12A0A075B6C4 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC16.57■□□□□ 0.24
Trav21-dv12A0A075B6C4 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC16.56■□□□□ 0.24
Trav21-dv12A0A075B6C4 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trav21-dv12A0A075B6C4 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC16.56■□□□□ 0.24
Trav21-dv12A0A075B6C4 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trav21-dv12A0A075B6C4 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Trav21-dv12A0A075B6C4 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trav21-dv12A0A075B6C4 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Trav21-dv12A0A075B6C4 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trav21-dv12A0A075B6C4 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Trav21-dv12A0A075B6C4 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trav21-dv12A0A075B6C4 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Trav21-dv12A0A075B6C4 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 50.5 ms