Protein–RNA interactions for Protein: A0A075B654

Trav3-4, T cell receptor alpha variable 3-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-4A0A075B654 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav3-4A0A075B654 Gm26766-202ENSMUST00000227544 2347 ntBASIC14.61□□□□□ -0.07
Trav3-4A0A075B654 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav3-4A0A075B654 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav3-4A0A075B654 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC14.61□□□□□ -0.07
Trav3-4A0A075B654 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav3-4A0A075B654 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav3-4A0A075B654 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC14.61□□□□□ -0.07
Trav3-4A0A075B654 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav3-4A0A075B654 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav3-4A0A075B654 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Trav3-4A0A075B654 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Trav3-4A0A075B654 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav3-4A0A075B654 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Trav3-4A0A075B654 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav3-4A0A075B654 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
Trav3-4A0A075B654 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Trav3-4A0A075B654 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav3-4A0A075B654 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav3-4A0A075B654 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav3-4A0A075B654 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav3-4A0A075B654 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav3-4A0A075B654 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC14.59□□□□□ -0.07
Trav3-4A0A075B654 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav3-4A0A075B654 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Trav3-4A0A075B654 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Trav3-4A0A075B654 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav3-4A0A075B654 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav3-4A0A075B654 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav3-4A0A075B654 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Trav3-4A0A075B654 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
Trav3-4A0A075B654 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav3-4A0A075B654 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav3-4A0A075B654 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav3-4A0A075B654 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Trav3-4A0A075B654 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Trav3-4A0A075B654 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Trav3-4A0A075B654 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav3-4A0A075B654 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Trav3-4A0A075B654 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Trav3-4A0A075B654 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Trav3-4A0A075B654 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Trav3-4A0A075B654 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav3-4A0A075B654 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav3-4A0A075B654 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Trav3-4A0A075B654 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC14.57□□□□□ -0.08
Trav3-4A0A075B654 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC14.56□□□□□ -0.08
Trav3-4A0A075B654 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav3-4A0A075B654 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC14.56□□□□□ -0.08
Trav3-4A0A075B654 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav3-4A0A075B654 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav3-4A0A075B654 Gm26115-201ENSMUST00000175605 87 ntBASIC14.56□□□□□ -0.08
Trav3-4A0A075B654 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Trav3-4A0A075B654 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Trav3-4A0A075B654 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Trav3-4A0A075B654 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav3-4A0A075B654 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav3-4A0A075B654 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav3-4A0A075B654 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Trav3-4A0A075B654 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav3-4A0A075B654 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav3-4A0A075B654 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Trav3-4A0A075B654 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav3-4A0A075B654 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav3-4A0A075B654 Gm15043-201ENSMUST00000118843 1543 ntBASIC14.55□□□□□ -0.08
Trav3-4A0A075B654 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Trav3-4A0A075B654 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav3-4A0A075B654 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav3-4A0A075B654 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav3-4A0A075B654 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav3-4A0A075B654 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav3-4A0A075B654 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav3-4A0A075B654 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav3-4A0A075B654 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav3-4A0A075B654 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav3-4A0A075B654 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav3-4A0A075B654 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Trav3-4A0A075B654 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Trav3-4A0A075B654 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav3-4A0A075B654 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav3-4A0A075B654 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC14.53□□□□□ -0.08
Trav3-4A0A075B654 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav3-4A0A075B654 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav3-4A0A075B654 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav3-4A0A075B654 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
Trav3-4A0A075B654 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav3-4A0A075B654 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav3-4A0A075B654 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Trav3-4A0A075B654 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav3-4A0A075B654 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
Trav3-4A0A075B654 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trav3-4A0A075B654 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trav3-4A0A075B654 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trav3-4A0A075B654 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trav3-4A0A075B654 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC14.52□□□□□ -0.09
Trav3-4A0A075B654 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav3-4A0A075B654 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC14.52□□□□□ -0.09
Trav3-4A0A075B654 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav3-4A0A075B654 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC14.52□□□□□ -0.09
Trav3-4A0A075B654 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 100.9 ms