Protein–RNA interactions for Protein: P43243

MATR3, Matrin-3, humanhuman

Known RBP eCLIP

Length 847 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3P43243 CDC27-204ENST00000527547 2579 ntAPPRIS ALT1 TSL 1 (best) BASIC10.03□□□□□ -0.85e-11■□□□□ 9.1
MATR3P43243 CDC27-201ENST00000066544 5801 ntAPPRIS P3 TSL 1 (best) BASIC9.28□□□□□ -0.925e-11■□□□□ 9.1
MATR3P43243 CDC27-208ENST00000532575 765 ntTSL 38.91□□□□□ -0.985e-11■□□□□ 9.1
MATR3P43243 BRWD1-203ENST00000342449 12929 ntTSL 1 (best) BASIC8.47□□□□□ -1.057e-6■□□□□ 9.1
MATR3P43243 CDC27-215ENST00000573550 583 ntTSL 34.91□□□□□ -1.625e-11■□□□□ 9.1
MATR3P43243 NCKAP1-208ENST00000495619 665 ntTSL 34.78□□□□□ -1.647e-6■□□□□ 9.1
MATR3P43243 BRWD1-207ENST00000430093 1656 ntTSL 1 (best)4.34□□□□□ -1.717e-6■□□□□ 9.1
MATR3P43243 BRWD1-208ENST00000445245 1682 ntTSL 1 (best)4.34□□□□□ -1.717e-6■□□□□ 9.1
MATR3P43243 BRWD1-205ENST00000412604 1756 ntTSL 1 (best)4.17□□□□□ -1.747e-6■□□□□ 9.1
MATR3P43243 BRWD1-211ENST00000455867 1644 ntTSL 1 (best)4.03□□□□□ -1.777e-6■□□□□ 9.1
MATR3P43243 BRWD1-210ENST00000446924 4990 ntTSL 23.92□□□□□ -1.787e-6■□□□□ 9.1
MATR3P43243 BRWD1-209ENST00000445668 1593 ntTSL 1 (best)3.72□□□□□ -1.817e-6■□□□□ 9.1
MATR3P43243 ZNF638-225ENST00000494241 703 ntTSL 33.53□□□□□ -1.841e-11■□□□□ 9.1
MATR3P43243 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.35□□□□□ -1.875e-11■□□□□ 9.1
MATR3P43243 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC4.53□□□□□ -1.682e-16■□□□□ 9.1
MATR3P43243 MED13L-203ENST00000548743 568 ntTSL 38.36□□□□□ -1.073e-6■□□□□ 9.1
MATR3P43243 CTNND1-224ENST00000530068 579 ntTSL 412.08□□□□□ -0.481e-12■□□□□ 9.1
MATR3P43243 NUP214-227ENST00000531929 593 ntTSL 41.81□□□□□ -2.125e-7■□□□□ 9.1
MATR3P43243 A2M-208ENST00000497324 533 ntTSL 311.53□□□□□ -0.564e-18■□□□□ 9
MATR3P43243 A2M-202ENST00000404455 623 ntTSL 55.96□□□□□ -1.464e-18■□□□□ 9
MATR3P43243 A2M-209ENST00000539638 590 ntTSL 45.8□□□□□ -1.484e-18■□□□□ 9
MATR3P43243 A2M-204ENST00000467091 533 ntTSL 53.58□□□□□ -1.844e-18■□□□□ 9
MATR3P43243 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC30.57■■■□□ 2.488e-10■□□□□ 9
MATR3P43243 TIAL1-210ENST00000479729 485 ntTSL 319.78■□□□□ 0.763e-6■□□□□ 9
MATR3P43243 TIAL1-211ENST00000489822 2222 ntTSL 217.96■□□□□ 0.473e-6■□□□□ 9
MATR3P43243 TIAL1-213ENST00000497671 2321 ntTSL 1 (best)16.2■□□□□ 0.183e-6■□□□□ 9
MATR3P43243 PPIH-201ENST00000304979 752 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.993e-6■□□□□ 9
MATR3P43243 TIAL1-205ENST00000436547 1401 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.13e-6■□□□□ 9
MATR3P43243 TIAL1-203ENST00000369093 5072 ntTSL 2 BASIC8.11□□□□□ -1.113e-6■□□□□ 9
MATR3P43243 PPIH-206ENST00000461351 527 ntTSL 36.75□□□□□ -1.333e-6■□□□□ 9
MATR3P43243 PDCD6IP-211ENST00000482561 626 ntTSL 56.15□□□□□ -1.423e-6■□□□□ 9
MATR3P43243 PDCD6IP-202ENST00000412887 842 ntTSL 34.45□□□□□ -1.73e-6■□□□□ 9
MATR3P43243 PDCD6IP-213ENST00000487821 750 ntTSL 44.29□□□□□ -1.723e-6■□□□□ 9
MATR3P43243 PEG3-203ENST00000594389 411 ntTSL 324.09■■□□□ 1.451e-6■□□□□ 9
MATR3P43243 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.311e-6■□□□□ 9
MATR3P43243 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC22.3■■□□□ 1.161e-6■□□□□ 9
MATR3P43243 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC22.19■■□□□ 1.141e-6■□□□□ 9
MATR3P43243 PEG3-204ENST00000594706 583 ntTSL 320.43■□□□□ 0.861e-6■□□□□ 9
MATR3P43243 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC19.29■□□□□ 0.681e-6■□□□□ 9
MATR3P43243 PEG3-209ENST00000599577 5052 ntAPPRIS P1 TSL 1 (best)17.61■□□□□ 0.411e-6■□□□□ 9
MATR3P43243 PEG3-202ENST00000593695 4741 ntTSL 1 (best) BASIC14.19□□□□□ -0.141e-6■□□□□ 9
MATR3P43243 ZIM2-203ENST00000595671 2054 ntTSL 1 (best)13.89□□□□□ -0.191e-6■□□□□ 9
MATR3P43243 ZIM2-207ENST00000601070 1965 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.721e-6■□□□□ 9
MATR3P43243 PEG3-201ENST00000326441 8723 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.751e-6■□□□□ 9
MATR3P43243 ZIM2-205ENST00000597281 2037 ntTSL 1 (best)9.49□□□□□ -0.891e-6■□□□□ 9
MATR3P43243 PEG3-205ENST00000596261 570 ntTSL 49.02□□□□□ -0.971e-6■□□□□ 9
MATR3P43243 PON2-212ENST00000490778 694 ntTSL 525.18■■□□□ 1.628e-6■□□□□ 8.9
MATR3P43243 PON2-204ENST00000455123 1515 ntTSL 1 (best)24.93■■□□□ 1.588e-6■□□□□ 8.9
MATR3P43243 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC24.78■■□□□ 1.568e-6■□□□□ 8.9
MATR3P43243 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC24.75■■□□□ 1.558e-6■□□□□ 8.9
MATR3P43243 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.558e-6■□□□□ 8.9
MATR3P43243 PON2-209ENST00000471883 451 ntTSL 324.22■■□□□ 1.478e-6■□□□□ 8.9
MATR3P43243 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.382e-7■□□□□ 8.9
MATR3P43243 PON2-208ENST00000469926 645 ntTSL 323.08■■□□□ 1.298e-6■□□□□ 8.9
MATR3P43243 ORMDL1-206ENST00000458355 914 ntTSL 321.01■□□□□ 0.952e-7■□□□□ 8.9
MATR3P43243 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.782e-7■□□□□ 8.9
MATR3P43243 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC19.2■□□□□ 0.668e-6■□□□□ 8.9
MATR3P43243 PON2-214ENST00000493290 550 ntTSL 419.12■□□□□ 0.658e-6■□□□□ 8.9
MATR3P43243 PON2-215ENST00000493469 579 ntTSL 219.12■□□□□ 0.658e-6■□□□□ 8.9
MATR3P43243 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.618e-6■□□□□ 8.9
MATR3P43243 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.592e-7■□□□□ 8.9
MATR3P43243 PON2-213ENST00000491069 566 ntTSL 218.45■□□□□ 0.548e-6■□□□□ 8.9
MATR3P43243 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.512e-7■□□□□ 8.9
MATR3P43243 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.58e-6■□□□□ 8.9
MATR3P43243 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.492e-7■□□□□ 8.9
MATR3P43243 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC17.81■□□□□ 0.448e-6■□□□□ 8.9
MATR3P43243 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC17.39■□□□□ 0.378e-6■□□□□ 8.9
MATR3P43243 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.378e-6■□□□□ 8.9
MATR3P43243 HS3ST3B1-202ENST00000466596 2808 ntTSL 216.84■□□□□ 0.292e-7■□□□□ 8.9
MATR3P43243 YPEL2-202ENST00000581865 480 ntTSL 216.8■□□□□ 0.288e-6■□□□□ 8.9
MATR3P43243 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC16.2■□□□□ 0.188e-6■□□□□ 8.9
MATR3P43243 ACTN1-211ENST00000553882 2636 ntTSL 216.14■□□□□ 0.178e-6■□□□□ 8.9
MATR3P43243 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.138e-6■□□□□ 8.9
MATR3P43243 ZNRF3-202ENST00000406323 2878 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.126e-11■□□□□ 8.9
MATR3P43243 ZNF37A-204ENST00000479469 1148 ntTSL 515.6■□□□□ 0.092e-7■□□□□ 8.9
MATR3P43243 SLC13A3-205ENST00000417157 876 ntTSL 1 (best) BASIC15.55■□□□□ 0.088e-6■□□□□ 8.9
MATR3P43243 NPTN-209ENST00000565325 858 ntTSL 215.34■□□□□ 0.058e-6■□□□□ 8.9
MATR3P43243 ZSCAN16-AS1-201ENST00000600652 2163 ntTSL 2 BASIC15.32■□□□□ 0.048e-6■□□□□ 8.9
MATR3P43243 NPTN-201ENST00000345330 2444 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.018e-6■□□□□ 8.9
MATR3P43243 NPTN-204ENST00000562924 1094 ntTSL 1 (best) BASIC14.83□□□□□ -0.048e-6■□□□□ 8.9
MATR3P43243 TBC1D14-208ENST00000451522 4149 ntAPPRIS ALT1 TSL 5 BASIC14.79□□□□□ -0.048e-6■□□□□ 8.9
MATR3P43243 AC106869.1-201ENST00000448713 577 ntTSL 4 BASIC14.75□□□□□ -0.052e-9■□□□□ 8.9
MATR3P43243 ZNF691-201ENST00000372502 1910 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.068e-6■□□□□ 8.9
MATR3P43243 NPTN-IT1-201ENST00000628401 2283 ntBASIC14.63□□□□□ -0.078e-6■□□□□ 8.9
MATR3P43243 ORMDL1-204ENST00000409519 1223 ntTSL 3 BASIC14.22□□□□□ -0.132e-7■□□□□ 8.9
MATR3P43243 CASC9-203ENST00000522183 833 ntTSL 313.95□□□□□ -0.188e-6■□□□□ 8.9
MATR3P43243 DPP4-204ENST00000434918 2674 ntTSL 1 (best)13.86□□□□□ -0.194e-8■□□□□ 8.9
MATR3P43243 COG7-201ENST00000307149 2926 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.28e-6■□□□□ 8.9
MATR3P43243 NPTN-205ENST00000563691 1214 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.238e-6■□□□□ 8.9
MATR3P43243 TBC1D14-201ENST00000409757 4925 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.248e-6■□□□□ 8.9
MATR3P43243 NFIA-207ENST00000403491 9487 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.258e-6■□□□□ 8.9
MATR3P43243 YPEL2-201ENST00000312655 5217 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.268e-6■□□□□ 8.9
MATR3P43243 ZNF37A-206ENST00000638053 4448 ntTSL 5 BASIC13.41□□□□□ -0.262e-7■□□□□ 8.9
MATR3P43243 ACTN1-214ENST00000555075 828 ntTSL 313.3□□□□□ -0.288e-6■□□□□ 8.9
MATR3P43243 C3orf35-205ENST00000426078 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.322e-12■□□□□ 8.9
MATR3P43243 NFIA-210ENST00000479364 1010 ntTSL 513.05□□□□□ -0.328e-6■□□□□ 8.9
MATR3P43243 DPP4-201ENST00000360534 3904 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.324e-8■□□□□ 8.9
MATR3P43243 NFIA-202ENST00000371184 1348 ntTSL 5 BASIC12.95□□□□□ -0.348e-6■□□□□ 8.9
MATR3P43243 DPP4-202ENST00000413651 578 ntTSL 412.67□□□□□ -0.384e-8■□□□□ 8.9
MATR3P43243 DPP4-211ENST00000628861 433 ntTSL 5 BASIC12.67□□□□□ -0.384e-8■□□□□ 8.9
Retrieved 100 of 16,209 protein–RNA pairs in 276.9 ms