Protein–RNA interactions for Protein: P43243

MATR3, Matrin-3, humanhuman

Known RBP eCLIP

Length 847 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3P43243 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC5.31□□□□□ -1.562e-6■□□□□ 9.3
MATR3P43243 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC5.25□□□□□ -1.572e-6■□□□□ 9.3
MATR3P43243 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC4.66□□□□□ -1.662e-6■□□□□ 9.3
MATR3P43243 ZNF638-202ENST00000409407 4470 ntTSL 22.17□□□□□ -2.065e-7■□□□□ 9.3
MATR3P43243 ZNF638-219ENST00000487638 4233 ntTSL 1 (best)2.11□□□□□ -2.075e-7■□□□□ 9.3
MATR3P43243 PMS2P3-205ENST00000437568 1185 ntTSL 527.43■■□□□ 1.983e-6■□□□□ 9.3
MATR3P43243 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC27.4■■□□□ 1.985e-6■□□□□ 9.3
MATR3P43243 MXI1-207ENST00000453116 803 ntTSL 526.58■■□□□ 1.855e-6■□□□□ 9.3
MATR3P43243 MXI1-208ENST00000460667 782 ntTSL 325.7■■□□□ 1.75e-6■□□□□ 9.3
MATR3P43243 PMS2P3-202ENST00000418756 1490 ntTSL 325.61■■□□□ 1.693e-6■□□□□ 9.3
MATR3P43243 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.625e-6■□□□□ 9.3
MATR3P43243 PMS2P3-201ENST00000394921 1316 ntTSL 225.08■■□□□ 1.63e-6■□□□□ 9.3
MATR3P43243 CRLF1-205ENST00000597131 520 ntTSL 225■■□□□ 1.595e-6■□□□□ 9.3
MATR3P43243 RBM14-207ENST00000461478 693 ntTSL 223■■□□□ 1.275e-6■□□□□ 9.3
MATR3P43243 PABPC1L-216ENST00000490798 1384 ntTSL 321.09■□□□□ 0.975e-6■□□□□ 9.3
MATR3P43243 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC18.3■□□□□ 0.525e-6■□□□□ 9.3
MATR3P43243 PMS2P3-204ENST00000430602 1005 ntTSL 217.4■□□□□ 0.383e-6■□□□□ 9.3
MATR3P43243 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC17.36■□□□□ 0.375e-6■□□□□ 9.3
MATR3P43243 MXI1-205ENST00000393134 889 ntTSL 2 BASIC16.78■□□□□ 0.285e-6■□□□□ 9.3
MATR3P43243 ZNF226-203ENST00000413984 716 ntTSL 3 BASIC15.39■□□□□ 0.055e-6■□□□□ 9.3
MATR3P43243 ZNF226-210ENST00000588127 567 ntTSL 414.88□□□□□ -0.035e-6■□□□□ 9.3
MATR3P43243 RBM14-205ENST00000443702 732 ntTSL 3 BASIC14.42□□□□□ -0.15e-6■□□□□ 9.3
MATR3P43243 ZNF226-201ENST00000300823 817 ntTSL 1 (best) BASIC14.39□□□□□ -0.115e-6■□□□□ 9.3
MATR3P43243 DESI1-201ENST00000263256 3833 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.25e-6■□□□□ 9.3
MATR3P43243 MXI1-206ENST00000442296 634 ntTSL 513.71□□□□□ -0.215e-6■□□□□ 9.3
MATR3P43243 ZNF226-206ENST00000585678 579 ntTSL 413.53□□□□□ -0.245e-6■□□□□ 9.3
MATR3P43243 PABPC1L-205ENST00000372819 2100 ntTSL 2 BASIC13.37□□□□□ -0.275e-6■□□□□ 9.3
MATR3P43243 RBM14-203ENST00000409372 876 ntTSL 2 BASIC13.32□□□□□ -0.285e-6■□□□□ 9.3
MATR3P43243 GSTM4-202ENST00000336075 657 ntAPPRIS ALT1 TSL 1 (best) BASIC13.09□□□□□ -0.315e-6■□□□□ 9.3
MATR3P43243 GSTM4-213ENST00000638994 657 ntTSL 5 BASIC13.09□□□□□ -0.315e-6■□□□□ 9.3
MATR3P43243 MTR-202ENST00000366577 10529 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.395e-6■□□□□ 9.3
MATR3P43243 GSTM2-202ENST00000369827 1073 ntTSL 5 BASIC12.58□□□□□ -0.45e-6■□□□□ 9.3
MATR3P43243 MTR-201ENST00000366576 5234 ntTSL 1 (best)12.51□□□□□ -0.415e-6■□□□□ 9.3
MATR3P43243 MTR-205ENST00000535889 10405 ntTSL 1 (best) BASIC12.38□□□□□ -0.435e-6■□□□□ 9.3
MATR3P43243 ZNF226-204ENST00000454662 2605 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.515e-6■□□□□ 9.3
MATR3P43243 GSTM2-210ENST00000472225 902 ntTSL 311.78□□□□□ -0.525e-6■□□□□ 9.3
MATR3P43243 GSTM2-201ENST00000241337 1157 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.545e-6■□□□□ 9.3
MATR3P43243 ZNF226-202ENST00000337433 2565 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.575e-6■□□□□ 9.3
MATR3P43243 PABPC1L-208ENST00000372826 854 ntTSL 511.36□□□□□ -0.595e-6■□□□□ 9.3
MATR3P43243 GSTM2-213ENST00000496578 1168 ntTSL 211.18□□□□□ -0.625e-6■□□□□ 9.3
MATR3P43243 PLG-202ENST00000308192 2741 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.645e-6■□□□□ 9.3
MATR3P43243 ZNF226-215ENST00000590089 2788 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.695e-6■□□□□ 9.3
MATR3P43243 GSTM2-203ENST00000369829 914 ntTSL 3 BASIC10.66□□□□□ -0.75e-6■□□□□ 9.3
MATR3P43243 PLG-205ENST00000461414 661 ntTSL 510.46□□□□□ -0.735e-6■□□□□ 9.3
MATR3P43243 GREB1-208ENST00000470980 833 ntTSL 310.13□□□□□ -0.795e-6■□□□□ 9.3
MATR3P43243 ZNF226-217ENST00000590524 616 ntTSL 310.06□□□□□ -0.85e-6■□□□□ 9.3
MATR3P43243 MXI1-210ENST00000485566 2755 ntTSL 1 (best)9.72□□□□□ -0.855e-6■□□□□ 9.3
MATR3P43243 ZNF226-209ENST00000586914 576 ntTSL 59.64□□□□□ -0.875e-6■□□□□ 9.3
MATR3P43243 ZNF226-218ENST00000590578 548 ntTSL 1 (best)9.59□□□□□ -0.875e-6■□□□□ 9.3
MATR3P43243 QKI-211ENST00000540719 588 ntTSL 29.52□□□□□ -0.895e-6■□□□□ 9.3
MATR3P43243 ZNF226-213ENST00000588883 5972 ntTSL 1 (best) BASIC9.41□□□□□ -0.95e-6■□□□□ 9.3
MATR3P43243 PLRG1-201ENST00000302078 1673 ntTSL 1 (best) BASIC9.32□□□□□ -0.925e-6■□□□□ 9.3
MATR3P43243 PMS2P3-208ENST00000533167 637 ntTSL 1 (best)9.22□□□□□ -0.933e-6■□□□□ 9.3
MATR3P43243 GSTM2-209ENST00000467579 476 ntTSL 38.89□□□□□ -0.995e-6■□□□□ 9.3
MATR3P43243 GSTM2-204ENST00000369831 1730 ntTSL 2 BASIC8.79□□□□□ -15e-6■□□□□ 9.3
MATR3P43243 MXI1-203ENST00000361248 2188 ntTSL 1 (best) BASIC8.69□□□□□ -1.025e-6■□□□□ 9.3
MATR3P43243 PLG-207ENST00000467466 565 ntTSL 28.53□□□□□ -1.045e-6■□□□□ 9.3
MATR3P43243 MXI1-204ENST00000369612 879 ntTSL 3 BASIC8□□□□□ -1.135e-6■□□□□ 9.3
MATR3P43243 MXI1-209ENST00000484030 838 ntTSL 57.82□□□□□ -1.165e-6■□□□□ 9.3
MATR3P43243 GSTM2-207ENST00000460717 1449 ntTSL 2 BASIC7.6□□□□□ -1.195e-6■□□□□ 9.3
MATR3P43243 RBM14-208ENST00000496694 562 ntTSL 57.5□□□□□ -1.215e-6■□□□□ 9.3
MATR3P43243 PMS2P3-203ENST00000422064 567 ntTSL 5 BASIC7.25□□□□□ -1.253e-6■□□□□ 9.3
MATR3P43243 PLRG1-202ENST00000499023 3351 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.265e-6■□□□□ 9.3
MATR3P43243 GSTM2-205ENST00000414179 982 ntTSL 1 (best) BASIC7.1□□□□□ -1.275e-6■□□□□ 9.3
MATR3P43243 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC5.9□□□□□ -1.475e-6■□□□□ 9.3
MATR3P43243 PMS2P3-206ENST00000438326 229 ntTSL 55.73□□□□□ -1.493e-6■□□□□ 9.3
MATR3P43243 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC5.59□□□□□ -1.515e-6■□□□□ 9.3
MATR3P43243 PLRG1-207ENST00000506627 998 ntTSL 55.24□□□□□ -1.575e-6■□□□□ 9.3
MATR3P43243 ATP11C-209ENST00000485626 643 ntTSL 55.21□□□□□ -1.585e-6■□□□□ 9.3
MATR3P43243 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC4.08□□□□□ -1.765e-6■□□□□ 9.3
MATR3P43243 QKI-213ENST00000544361 613 ntTSL 53.64□□□□□ -1.835e-6■□□□□ 9.3
MATR3P43243 PLRG1-203ENST00000503251 365 ntTSL 33.13□□□□□ -1.915e-6■□□□□ 9.3
MATR3P43243 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC24.58■■□□□ 1.535e-6■□□□□ 9.2
MATR3P43243 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.785e-6■□□□□ 9.2
MATR3P43243 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC18.62■□□□□ 0.575e-6■□□□□ 9.2
MATR3P43243 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.265e-6■□□□□ 9.2
MATR3P43243 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.792e-11■□□□□ 9.2
MATR3P43243 USP7-208ENST00000563961 4533 ntTSL 516.25■□□□□ 0.192e-11■□□□□ 9.2
MATR3P43243 USP7-203ENST00000542333 1966 ntTSL 29.95□□□□□ -0.822e-11■□□□□ 9.2
MATR3P43243 USP7-207ENST00000563085 3194 ntTSL 26.79□□□□□ -1.322e-11■□□□□ 9.2
MATR3P43243 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC5.98□□□□□ -1.452e-11■□□□□ 9.2
MATR3P43243 USP7-210ENST00000565455 3554 ntTSL 25.92□□□□□ -1.462e-11■□□□□ 9.2
MATR3P43243 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.471e-7■□□□□ 9.2
MATR3P43243 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.81e-18■□□□□ 9.2
MATR3P43243 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.241e-18■□□□□ 9.2
MATR3P43243 AL132780.3-201ENST00000555074 835 ntAPPRIS P1 TSL 2 BASIC11.39□□□□□ -0.591e-18■□□□□ 9.2
MATR3P43243 AJUBA-208ENST00000556731 651 ntTSL 48.06□□□□□ -1.121e-18■□□□□ 9.2
MATR3P43243 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC27■■□□□ 1.913e-14■□□□□ 9.2
MATR3P43243 CRTAP-201ENST00000320954 6630 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.143e-14■□□□□ 9.2
MATR3P43243 SLF2-201ENST00000238961 7288 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.422e-8■□□□□ 9.1
MATR3P43243 SLF2-202ENST00000370269 3712 ntAPPRIS ALT2 TSL 1 (best) BASIC7.8□□□□□ -1.162e-8■□□□□ 9.1
MATR3P43243 CDC27-203ENST00000526866 1420 ntTSL 220.15■□□□□ 0.825e-11■□□□□ 9.1
MATR3P43243 PRSS16-220ENST00000495683 914 ntTSL 319.03■□□□□ 0.642e-7■□□□□ 9.1
MATR3P43243 CDC27-209ENST00000532893 515 ntTSL 315.69■□□□□ 0.15e-11■□□□□ 9.1
MATR3P43243 BRWD1-201ENST00000333229 10141 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.097e-6■□□□□ 9.1
MATR3P43243 CDC27-217ENST00000575483 781 ntTSL 515.09■□□□□ 0.015e-11■□□□□ 9.1
MATR3P43243 BRWD1-204ENST00000380800 7605 ntTSL 1 (best) BASIC15.09■□□□□ 0.017e-6■□□□□ 9.1
MATR3P43243 CDC27-210ENST00000533415 2570 ntTSL 214.74□□□□□ -0.055e-11■□□□□ 9.1
MATR3P43243 CDC27-202ENST00000525495 1459 ntTSL 512.96□□□□□ -0.345e-11■□□□□ 9.1
MATR3P43243 CDC27-206ENST00000528748 859 ntTSL 311.96□□□□□ -0.495e-11■□□□□ 9.1
Retrieved 100 of 16,209 protein–RNA pairs in 535.7 ms