Protein–RNA interactions for Protein: P43243

MATR3, Matrin-3, humanhuman

Known RBP eCLIP

Length 847 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3P43243 PKM-203ENST00000389093 2279 ntTSL 5 BASIC26.86■■□□□ 1.893e-7■□□□□ 9.6
MATR3P43243 PKM-204ENST00000449901 2526 ntTSL 2 BASIC26.4■■□□□ 1.823e-7■□□□□ 9.6
MATR3P43243 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC24.5■■□□□ 1.513e-7■□□□□ 9.6
MATR3P43243 PKM-217ENST00000566809 560 ntTSL 422.2■■□□□ 1.143e-7■□□□□ 9.6
MATR3P43243 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC22.02■■□□□ 1.123e-7■□□□□ 9.6
MATR3P43243 PKM-218ENST00000567087 550 ntTSL 420.3■□□□□ 0.843e-7■□□□□ 9.6
MATR3P43243 PKM-223ENST00000569050 457 ntTSL 418.26■□□□□ 0.513e-7■□□□□ 9.6
MATR3P43243 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC18.23■□□□□ 0.513e-7■□□□□ 9.6
MATR3P43243 PKM-222ENST00000568883 1863 ntTSL 5 BASIC13.89□□□□□ -0.193e-7■□□□□ 9.6
MATR3P43243 PKM-224ENST00000569857 1355 ntTSL 513.63□□□□□ -0.233e-7■□□□□ 9.6
MATR3P43243 PKM-202ENST00000335181 2318 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.253e-7■□□□□ 9.6
MATR3P43243 PKM-219ENST00000567118 2254 ntTSL 212.33□□□□□ -0.443e-7■□□□□ 9.6
MATR3P43243 PKM-211ENST00000564276 753 ntTSL 1 (best)9.92□□□□□ -0.823e-7■□□□□ 9.6
MATR3P43243 TMEM116-218ENST00000552839 511 ntTSL 412.45□□□□□ -0.421e-8■□□□□ 9.6
MATR3P43243 TMEM116-216ENST00000552800 485 ntTSL 310.5□□□□□ -0.731e-8■□□□□ 9.6
MATR3P43243 TMEM116-211ENST00000550233 571 ntAPPRIS ALT2 TSL 54.96□□□□□ -1.621e-8■□□□□ 9.6
MATR3P43243 TMEM116-204ENST00000546962 319 ntAPPRIS ALT2 TSL 53.05□□□□□ -1.921e-8■□□□□ 9.6
MATR3P43243 EMP2-202ENST00000359543 5197 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.499e-9■□□□□ 9.5
MATR3P43243 EMP2-201ENST00000342147 3582 ntTSL 28.16□□□□□ -1.19e-9■□□□□ 9.5
MATR3P43243 ACSL4-206ENST00000502391 802 ntTSL 322.61■■□□□ 1.212e-7■□□□□ 9.5
MATR3P43243 ACSL4-211ENST00000508092 637 ntTSL 420.52■□□□□ 0.882e-7■□□□□ 9.5
MATR3P43243 ACSL4-208ENST00000504980 573 ntTSL 418.42■□□□□ 0.542e-7■□□□□ 9.5
MATR3P43243 ACSL4-205ENST00000469857 506 ntTSL 1 (best)11.59□□□□□ -0.552e-7■□□□□ 9.5
MATR3P43243 ACSL4-207ENST00000504383 683 ntTSL 25.8□□□□□ -1.482e-7■□□□□ 9.5
MATR3P43243 FNDC3B-208ENST00000476794 682 ntTSL 35.73□□□□□ -1.493e-9■□□□□ 9.5
MATR3P43243 RB1CC1-206ENST00000518710 711 ntTSL 328.16■■■□□ 2.14e-6■□□□□ 9.5
MATR3P43243 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC26.73■■□□□ 1.876e-7■□□□□ 9.5
MATR3P43243 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.054e-6■□□□□ 9.5
MATR3P43243 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.866e-7■□□□□ 9.5
MATR3P43243 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.724e-6■□□□□ 9.5
MATR3P43243 RB1CC1-203ENST00000517963 551 ntTSL 419.53■□□□□ 0.724e-6■□□□□ 9.5
MATR3P43243 RB1CC1-204ENST00000518211 891 ntTSL 519.47■□□□□ 0.714e-6■□□□□ 9.5
MATR3P43243 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.214e-6■□□□□ 9.5
MATR3P43243 CAPN1-202ENST00000524773 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.034e-6■□□□□ 9.5
MATR3P43243 TBC1D22B-201ENST00000373491 3462 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.034e-6■□□□□ 9.5
MATR3P43243 CAPN1-208ENST00000527323 3086 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.184e-6■□□□□ 9.5
MATR3P43243 AC091959.3-201ENST00000506502 3311 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.224e-6■□□□□ 9.5
MATR3P43243 CAPN1-223ENST00000533079 878 ntTSL 313.45□□□□□ -0.264e-6■□□□□ 9.5
MATR3P43243 RBM27-201ENST00000265271 6451 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.524e-6■□□□□ 9.5
MATR3P43243 TEC-201ENST00000381501 3687 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.564e-6■□□□□ 9.5
MATR3P43243 TEC-202ENST00000505452 2446 ntTSL 58.38□□□□□ -1.074e-6■□□□□ 9.5
MATR3P43243 BRWD3-201ENST00000373275 11381 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.22e-9■□□□□ 9.5
MATR3P43243 RB1CC1-205ENST00000518468 507 ntTSL 34.12□□□□□ -1.754e-6■□□□□ 9.5
MATR3P43243 OXSR1-204ENST00000467900 612 ntTSL 53.29□□□□□ -1.886e-7■□□□□ 9.5
MATR3P43243 EHBP1-206ENST00000422032 669 ntTSL 55.74□□□□□ -1.493e-9■□□□□ 9.5
MATR3P43243 EHBP1-212ENST00000454124 329 ntTSL 35.35□□□□□ -1.553e-9■□□□□ 9.5
MATR3P43243 EHBP1-210ENST00000444311 460 ntTSL 54.29□□□□□ -1.723e-9■□□□□ 9.5
MATR3P43243 TXNDC11-206ENST00000573174 919 ntTSL 327.24■■□□□ 1.956e-8■□□□□ 9.4
MATR3P43243 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.586e-8■□□□□ 9.4
MATR3P43243 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC18.63■□□□□ 0.576e-8■□□□□ 9.4
MATR3P43243 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.568e-7■□□□□ 9.4
MATR3P43243 CMIP-206ENST00000565029 1559 ntTSL 1 (best)16.28■□□□□ 0.26e-8■□□□□ 9.4
MATR3P43243 EPS15L1-208ENST00000595845 567 ntTSL 215.12■□□□□ 0.016e-8■□□□□ 9.4
MATR3P43243 TXNDC11-208ENST00000575591 615 ntTSL 314.73□□□□□ -0.056e-8■□□□□ 9.4
MATR3P43243 DIDO1-205ENST00000370371 2833 ntTSL 1 (best) BASIC13.93□□□□□ -0.188e-7■□□□□ 9.4
MATR3P43243 EPS15L1-209ENST00000596037 629 ntTSL 313.18□□□□□ -0.36e-8■□□□□ 9.4
MATR3P43243 EPS15L1-205ENST00000593760 583 ntTSL 412.55□□□□□ -0.46e-8■□□□□ 9.4
MATR3P43243 TXNDC11-204ENST00000571882 581 ntTSL 511.36□□□□□ -0.596e-8■□□□□ 9.4
MATR3P43243 CHD2-210ENST00000627200 230 ntTSL 310.27□□□□□ -0.776e-8■□□□□ 9.4
MATR3P43243 CHD2-226ENST00000636881 3545 ntTSL 59.55□□□□□ -0.886e-8■□□□□ 9.4
MATR3P43243 EPS15L1-211ENST00000597559 743 ntTSL 29.51□□□□□ -0.896e-8■□□□□ 9.4
MATR3P43243 EPS15L1-216ENST00000602151 420 ntTSL 29.26□□□□□ -0.936e-8■□□□□ 9.4
MATR3P43243 TXNDC11-209ENST00000576969 863 ntTSL 38.14□□□□□ -1.116e-8■□□□□ 9.4
MATR3P43243 CHD2-214ENST00000628181 545 ntTSL 54.87□□□□□ -1.636e-8■□□□□ 9.4
MATR3P43243 CHD9-204ENST00000561869 720 ntTSL 21.88□□□□□ -2.114e-10■□□□□ 9.4
MATR3P43243 RAB1A-205ENST00000494188 771 ntTSL 225.17■■□□□ 1.621e-7■□□□□ 9.4
MATR3P43243 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC23.47■■□□□ 1.351e-7■□□□□ 9.4
MATR3P43243 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC19.62■□□□□ 0.731e-7■□□□□ 9.4
MATR3P43243 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.411e-7■□□□□ 9.4
MATR3P43243 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC15.59■□□□□ 0.091e-7■□□□□ 9.4
MATR3P43243 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC22.92■■□□□ 1.261e-11■□□□□ 9.4
MATR3P43243 GSPT1-204ENST00000562169 466 ntTSL 318.17■□□□□ 0.51e-11■□□□□ 9.4
MATR3P43243 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.41e-11■□□□□ 9.4
MATR3P43243 GSPT1-210ENST00000568849 790 ntTSL 315.28■□□□□ 0.041e-11■□□□□ 9.4
MATR3P43243 GSPT1-201ENST00000420576 1603 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.71e-11■□□□□ 9.4
MATR3P43243 KANSL1-214ENST00000576739 592 ntTSL 223.59■■□□□ 1.371e-6■□□□□ 9.4
MATR3P43243 KANSL1-221ENST00000638902 1971 ntTSL 214.28□□□□□ -0.121e-6■□□□□ 9.4
MATR3P43243 SOX5-211ENST00000538083 617 ntTSL 49.36□□□□□ -0.911e-6■□□□□ 9.4
MATR3P43243 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.345e-7■□□□□ 9.4
MATR3P43243 RNF145-202ENST00000424310 3613 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.165e-7■□□□□ 9.4
MATR3P43243 RNF145-208ENST00000520548 572 ntTSL 48.62□□□□□ -1.035e-7■□□□□ 9.4
MATR3P43243 RNF145-205ENST00000518802 2603 ntTSL 1 (best) BASIC8.02□□□□□ -1.135e-7■□□□□ 9.4
MATR3P43243 NFATC2IP-202ENST00000562977 638 ntTSL 428.76■■■□□ 2.191e-8■□□□□ 9.3
MATR3P43243 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.061e-8■□□□□ 9.3
MATR3P43243 NFATC2IP-207ENST00000568998 720 ntTSL 314.5□□□□□ -0.091e-8■□□□□ 9.3
MATR3P43243 NFATC2IP-203ENST00000564978 2350 ntTSL 1 (best) BASIC10.09□□□□□ -0.791e-8■□□□□ 9.3
MATR3P43243 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.354e-6■□□□□ 9.3
MATR3P43243 ARHGEF10L-202ENST00000361221 4488 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.045e-7■□□□□ 9.3
MATR3P43243 ARHGEF10L-204ENST00000375415 4035 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.45e-7■□□□□ 9.3
MATR3P43243 RBBP6-210ENST00000568015 695 ntTSL 317.61■□□□□ 0.412e-6■□□□□ 9.3
MATR3P43243 GALK2-213ENST00000559580 655 ntTSL 514.79□□□□□ -0.042e-6■□□□□ 9.3
MATR3P43243 RBBP6-201ENST00000319715 6229 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.522e-6■□□□□ 9.3
MATR3P43243 GALK2-205ENST00000558399 805 ntTSL 511.6□□□□□ -0.552e-6■□□□□ 9.3
MATR3P43243 SND1-IT1-201ENST00000623342 2481 ntBASIC9.1□□□□□ -0.953e-8■□□□□ 9.3
MATR3P43243 RBBP6-207ENST00000564314 3361 ntTSL 28.7□□□□□ -1.022e-6■□□□□ 9.3
MATR3P43243 GALK2-221ENST00000561014 797 ntTSL 37.43□□□□□ -1.222e-6■□□□□ 9.3
MATR3P43243 VPS13D-209ENST00000487188 3990 ntTSL 27.04□□□□□ -1.282e-6■□□□□ 9.3
MATR3P43243 VPS13D-202ENST00000460333 4910 ntTSL 26.91□□□□□ -1.32e-6■□□□□ 9.3
MATR3P43243 CDCA2-204ENST00000521098 2409 ntTSL 56.26□□□□□ -1.412e-6■□□□□ 9.3
MATR3P43243 RBBP6-209ENST00000567686 1138 ntTSL 55.37□□□□□ -1.552e-6■□□□□ 9.3
Retrieved 100 of 16,209 protein–RNA pairs in 603.6 ms