Protein–RNA interactions for Protein: S4R434

TMEM56-RWDD3, TMEM56-RWDD3 readthrough, humanhuman

Predictions only

Length 201 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM56-RWDD3S4R434 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
TMEM56-RWDD3S4R434 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TMEM56-RWDD3S4R434 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC19.74■□□□□ 0.75
TMEM56-RWDD3S4R434 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC19.74■□□□□ 0.75
TMEM56-RWDD3S4R434 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
TMEM56-RWDD3S4R434 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC19.74■□□□□ 0.75
TMEM56-RWDD3S4R434 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
TMEM56-RWDD3S4R434 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
TMEM56-RWDD3S4R434 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TMEM56-RWDD3S4R434 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TMEM56-RWDD3S4R434 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TMEM56-RWDD3S4R434 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
TMEM56-RWDD3S4R434 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC19.73■□□□□ 0.75
TMEM56-RWDD3S4R434 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
TMEM56-RWDD3S4R434 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TMEM56-RWDD3S4R434 AC087741.3-201ENST00000624270 1347 ntBASIC19.72■□□□□ 0.75
TMEM56-RWDD3S4R434 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TMEM56-RWDD3S4R434 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TMEM56-RWDD3S4R434 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC19.71■□□□□ 0.75
TMEM56-RWDD3S4R434 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
TMEM56-RWDD3S4R434 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TMEM56-RWDD3S4R434 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TMEM56-RWDD3S4R434 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TMEM56-RWDD3S4R434 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
TMEM56-RWDD3S4R434 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TMEM56-RWDD3S4R434 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC19.71■□□□□ 0.75
TMEM56-RWDD3S4R434 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
TMEM56-RWDD3S4R434 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TMEM56-RWDD3S4R434 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TMEM56-RWDD3S4R434 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
TMEM56-RWDD3S4R434 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
TMEM56-RWDD3S4R434 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TMEM56-RWDD3S4R434 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC19.7■□□□□ 0.74
TMEM56-RWDD3S4R434 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC19.7■□□□□ 0.74
TMEM56-RWDD3S4R434 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TMEM56-RWDD3S4R434 EED-207ENST00000528180 1745 ntTSL 5 BASIC19.7■□□□□ 0.74
TMEM56-RWDD3S4R434 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TMEM56-RWDD3S4R434 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TMEM56-RWDD3S4R434 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
TMEM56-RWDD3S4R434 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC19.69■□□□□ 0.74
TMEM56-RWDD3S4R434 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
TMEM56-RWDD3S4R434 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
TMEM56-RWDD3S4R434 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC19.69■□□□□ 0.74
TMEM56-RWDD3S4R434 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TMEM56-RWDD3S4R434 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC19.69■□□□□ 0.74
TMEM56-RWDD3S4R434 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TMEM56-RWDD3S4R434 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
TMEM56-RWDD3S4R434 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TMEM56-RWDD3S4R434 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
TMEM56-RWDD3S4R434 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
TMEM56-RWDD3S4R434 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC19.68■□□□□ 0.74
TMEM56-RWDD3S4R434 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TMEM56-RWDD3S4R434 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
TMEM56-RWDD3S4R434 AP003733.4-201ENST00000623785 1697 ntBASIC19.68■□□□□ 0.74
TMEM56-RWDD3S4R434 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC19.67■□□□□ 0.74
TMEM56-RWDD3S4R434 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TMEM56-RWDD3S4R434 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
TMEM56-RWDD3S4R434 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC19.67■□□□□ 0.74
TMEM56-RWDD3S4R434 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC19.67■□□□□ 0.74
TMEM56-RWDD3S4R434 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC19.67■□□□□ 0.74
TMEM56-RWDD3S4R434 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
TMEM56-RWDD3S4R434 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
TMEM56-RWDD3S4R434 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
TMEM56-RWDD3S4R434 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
TMEM56-RWDD3S4R434 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TMEM56-RWDD3S4R434 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
TMEM56-RWDD3S4R434 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TMEM56-RWDD3S4R434 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC19.65■□□□□ 0.74
TMEM56-RWDD3S4R434 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
TMEM56-RWDD3S4R434 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
TMEM56-RWDD3S4R434 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TMEM56-RWDD3S4R434 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TMEM56-RWDD3S4R434 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TMEM56-RWDD3S4R434 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
TMEM56-RWDD3S4R434 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
TMEM56-RWDD3S4R434 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC19.64■□□□□ 0.73
TMEM56-RWDD3S4R434 AC044849.2-201ENST00000606596 710 ntBASIC19.64■□□□□ 0.73
TMEM56-RWDD3S4R434 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC19.64■□□□□ 0.73
TMEM56-RWDD3S4R434 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TMEM56-RWDD3S4R434 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TMEM56-RWDD3S4R434 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC19.64■□□□□ 0.73
TMEM56-RWDD3S4R434 LINC01124-201ENST00000409786 2117 ntBASIC19.64■□□□□ 0.73
TMEM56-RWDD3S4R434 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TMEM56-RWDD3S4R434 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TMEM56-RWDD3S4R434 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
TMEM56-RWDD3S4R434 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TMEM56-RWDD3S4R434 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TMEM56-RWDD3S4R434 AC021231.2-201ENST00000594613 730 ntBASIC19.63■□□□□ 0.73
TMEM56-RWDD3S4R434 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC19.63■□□□□ 0.73
TMEM56-RWDD3S4R434 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC19.63■□□□□ 0.73
TMEM56-RWDD3S4R434 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
TMEM56-RWDD3S4R434 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TMEM56-RWDD3S4R434 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
TMEM56-RWDD3S4R434 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
TMEM56-RWDD3S4R434 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC19.62■□□□□ 0.73
TMEM56-RWDD3S4R434 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TMEM56-RWDD3S4R434 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TMEM56-RWDD3S4R434 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC19.61■□□□□ 0.73
TMEM56-RWDD3S4R434 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC19.61■□□□□ 0.73
TMEM56-RWDD3S4R434 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 154.5 ms