Protein–RNA interactions for Protein: Q9Y5Y9

SCN10A, Sodium channel protein type 10 subunit alpha, humanhuman

Predictions only

Length 1,956 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN10AQ9Y5Y9 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC27.05■■□□□ 1.92
SCN10AQ9Y5Y9 AC019069.1-201ENST00000610008 1333 ntBASIC27.05■■□□□ 1.92
SCN10AQ9Y5Y9 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC27.05■■□□□ 1.92
SCN10AQ9Y5Y9 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC27.04■■□□□ 1.92
SCN10AQ9Y5Y9 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
SCN10AQ9Y5Y9 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC27.04■■□□□ 1.92
SCN10AQ9Y5Y9 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC27.04■■□□□ 1.92
SCN10AQ9Y5Y9 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC27.04■■□□□ 1.92
SCN10AQ9Y5Y9 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC27.04■■□□□ 1.92
SCN10AQ9Y5Y9 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC27.04■■□□□ 1.92
SCN10AQ9Y5Y9 RNF146-205ENST00000477776 762 ntTSL 3 BASIC27.04■■□□□ 1.92
SCN10AQ9Y5Y9 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC27.04■■□□□ 1.92
SCN10AQ9Y5Y9 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC27.03■■□□□ 1.92
SCN10AQ9Y5Y9 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC27.03■■□□□ 1.92
SCN10AQ9Y5Y9 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC27.03■■□□□ 1.92
SCN10AQ9Y5Y9 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC27.02■■□□□ 1.92
SCN10AQ9Y5Y9 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC27.02■■□□□ 1.92
SCN10AQ9Y5Y9 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC27.02■■□□□ 1.92
SCN10AQ9Y5Y9 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC27.02■■□□□ 1.92
SCN10AQ9Y5Y9 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC27.02■■□□□ 1.92
SCN10AQ9Y5Y9 AL356441.2-201ENST00000443009 864 ntBASIC27.02■■□□□ 1.92
SCN10AQ9Y5Y9 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC27.02■■□□□ 1.92
SCN10AQ9Y5Y9 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
SCN10AQ9Y5Y9 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC27.01■■□□□ 1.92
SCN10AQ9Y5Y9 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC27.01■■□□□ 1.91
SCN10AQ9Y5Y9 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC27.01■■□□□ 1.91
SCN10AQ9Y5Y9 MTURN-203ENST00000409688 843 ntTSL 2 BASIC27.01■■□□□ 1.91
SCN10AQ9Y5Y9 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC27.01■■□□□ 1.91
SCN10AQ9Y5Y9 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC27■■□□□ 1.91
SCN10AQ9Y5Y9 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC27■■□□□ 1.91
SCN10AQ9Y5Y9 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
SCN10AQ9Y5Y9 LONRF2P2-201ENST00000439212 571 ntBASIC26.99■■□□□ 1.91
SCN10AQ9Y5Y9 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
SCN10AQ9Y5Y9 AC022616.5-201ENST00000518796 181 ntBASIC26.98■■□□□ 1.91
SCN10AQ9Y5Y9 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC26.98■■□□□ 1.91
SCN10AQ9Y5Y9 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
SCN10AQ9Y5Y9 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC26.98■■□□□ 1.91
SCN10AQ9Y5Y9 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
SCN10AQ9Y5Y9 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC26.98■■□□□ 1.91
SCN10AQ9Y5Y9 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC26.97■■□□□ 1.91
SCN10AQ9Y5Y9 AC239859.2-201ENST00000444165 318 ntBASIC26.97■■□□□ 1.91
SCN10AQ9Y5Y9 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
SCN10AQ9Y5Y9 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC26.97■■□□□ 1.91
SCN10AQ9Y5Y9 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
SCN10AQ9Y5Y9 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
SCN10AQ9Y5Y9 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC26.97■■□□□ 1.91
SCN10AQ9Y5Y9 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC26.96■■□□□ 1.91
SCN10AQ9Y5Y9 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
SCN10AQ9Y5Y9 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC26.96■■□□□ 1.91
SCN10AQ9Y5Y9 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC26.96■■□□□ 1.91
SCN10AQ9Y5Y9 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC26.96■■□□□ 1.91
SCN10AQ9Y5Y9 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC26.96■■□□□ 1.91
SCN10AQ9Y5Y9 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC26.96■■□□□ 1.91
SCN10AQ9Y5Y9 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC26.96■■□□□ 1.91
SCN10AQ9Y5Y9 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC26.95■■□□□ 1.9
SCN10AQ9Y5Y9 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC26.95■■□□□ 1.9
SCN10AQ9Y5Y9 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
SCN10AQ9Y5Y9 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC26.94■■□□□ 1.9
SCN10AQ9Y5Y9 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC26.94■■□□□ 1.9
SCN10AQ9Y5Y9 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC26.94■■□□□ 1.9
SCN10AQ9Y5Y9 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC26.94■■□□□ 1.9
SCN10AQ9Y5Y9 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC26.94■■□□□ 1.9
SCN10AQ9Y5Y9 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC26.94■■□□□ 1.9
SCN10AQ9Y5Y9 CREM-229ENST00000474362 1030 ntTSL 2 BASIC26.93■■□□□ 1.9
SCN10AQ9Y5Y9 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
SCN10AQ9Y5Y9 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
SCN10AQ9Y5Y9 KRT18P10-201ENST00000388836 1287 ntBASIC26.93■■□□□ 1.9
SCN10AQ9Y5Y9 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
SCN10AQ9Y5Y9 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC26.92■■□□□ 1.9
SCN10AQ9Y5Y9 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC26.92■■□□□ 1.9
SCN10AQ9Y5Y9 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
SCN10AQ9Y5Y9 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC26.92■■□□□ 1.9
SCN10AQ9Y5Y9 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC26.92■■□□□ 1.9
SCN10AQ9Y5Y9 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC26.91■■□□□ 1.9
SCN10AQ9Y5Y9 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC26.91■■□□□ 1.9
SCN10AQ9Y5Y9 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC26.91■■□□□ 1.9
SCN10AQ9Y5Y9 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC26.91■■□□□ 1.9
SCN10AQ9Y5Y9 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
SCN10AQ9Y5Y9 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
SCN10AQ9Y5Y9 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
SCN10AQ9Y5Y9 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC26.9■■□□□ 1.9
SCN10AQ9Y5Y9 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
SCN10AQ9Y5Y9 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
SCN10AQ9Y5Y9 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC26.9■■□□□ 1.9
SCN10AQ9Y5Y9 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
SCN10AQ9Y5Y9 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC26.89■■□□□ 1.9
SCN10AQ9Y5Y9 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC26.89■■□□□ 1.89
SCN10AQ9Y5Y9 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC26.89■■□□□ 1.89
SCN10AQ9Y5Y9 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC26.89■■□□□ 1.89
SCN10AQ9Y5Y9 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC26.88■■□□□ 1.89
SCN10AQ9Y5Y9 GRAMD4P7-201ENST00000578182 1232 ntBASIC26.88■■□□□ 1.89
SCN10AQ9Y5Y9 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
SCN10AQ9Y5Y9 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
SCN10AQ9Y5Y9 BX664725.1-201ENST00000438252 379 ntBASIC26.88■■□□□ 1.89
SCN10AQ9Y5Y9 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC26.86■■□□□ 1.89
SCN10AQ9Y5Y9 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC26.86■■□□□ 1.89
SCN10AQ9Y5Y9 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC26.86■■□□□ 1.89
SCN10AQ9Y5Y9 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
SCN10AQ9Y5Y9 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
SCN10AQ9Y5Y9 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC26.86■■□□□ 1.89
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms