Protein–RNA interactions for Protein: Q9Y5F0

PCDHB13, Protocadherin beta-13, humanhuman

Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB13Q9Y5F0 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC26.71■■□□□ 1.87
PCDHB13Q9Y5F0 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.87
PCDHB13Q9Y5F0 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
PCDHB13Q9Y5F0 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC26.7■■□□□ 1.86
PCDHB13Q9Y5F0 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
PCDHB13Q9Y5F0 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC26.7■■□□□ 1.86
PCDHB13Q9Y5F0 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
PCDHB13Q9Y5F0 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC26.69■■□□□ 1.86
PCDHB13Q9Y5F0 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
PCDHB13Q9Y5F0 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC26.69■■□□□ 1.86
PCDHB13Q9Y5F0 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
PCDHB13Q9Y5F0 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC26.68■■□□□ 1.86
PCDHB13Q9Y5F0 AC145676.1-201ENST00000514988 2004 ntBASIC26.68■■□□□ 1.86
PCDHB13Q9Y5F0 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
PCDHB13Q9Y5F0 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC26.68■■□□□ 1.86
PCDHB13Q9Y5F0 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
PCDHB13Q9Y5F0 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC26.68■■□□□ 1.86
PCDHB13Q9Y5F0 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC26.68■■□□□ 1.86
PCDHB13Q9Y5F0 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC26.68■■□□□ 1.86
PCDHB13Q9Y5F0 BRD4-212ENST00000630599 726 ntTSL 2 BASIC26.68■■□□□ 1.86
PCDHB13Q9Y5F0 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC26.68■■□□□ 1.86
PCDHB13Q9Y5F0 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC26.67■■□□□ 1.86
PCDHB13Q9Y5F0 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
PCDHB13Q9Y5F0 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC26.67■■□□□ 1.86
PCDHB13Q9Y5F0 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
PCDHB13Q9Y5F0 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC26.67■■□□□ 1.86
PCDHB13Q9Y5F0 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC26.66■■□□□ 1.86
PCDHB13Q9Y5F0 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC26.66■■□□□ 1.86
PCDHB13Q9Y5F0 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC26.66■■□□□ 1.86
PCDHB13Q9Y5F0 AC026202.3-201ENST00000600805 1127 ntBASIC26.66■■□□□ 1.86
PCDHB13Q9Y5F0 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
PCDHB13Q9Y5F0 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
PCDHB13Q9Y5F0 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
PCDHB13Q9Y5F0 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
PCDHB13Q9Y5F0 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
PCDHB13Q9Y5F0 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC26.65■■□□□ 1.86
PCDHB13Q9Y5F0 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
PCDHB13Q9Y5F0 DUSP8P4-201ENST00000399538 1761 ntBASIC26.65■■□□□ 1.86
PCDHB13Q9Y5F0 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
PCDHB13Q9Y5F0 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC26.65■■□□□ 1.86
PCDHB13Q9Y5F0 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
PCDHB13Q9Y5F0 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC26.64■■□□□ 1.86
PCDHB13Q9Y5F0 RAP2CP1-202ENST00000605179 643 ntBASIC26.64■■□□□ 1.86
PCDHB13Q9Y5F0 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.85
PCDHB13Q9Y5F0 SHF-207ENST00000560540 2062 ntTSL 5 BASIC26.64■■□□□ 1.85
PCDHB13Q9Y5F0 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
PCDHB13Q9Y5F0 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
PCDHB13Q9Y5F0 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC26.63■■□□□ 1.85
PCDHB13Q9Y5F0 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC26.62■■□□□ 1.85
PCDHB13Q9Y5F0 ERN1-208ENST00000606895 2068 ntBASIC26.62■■□□□ 1.85
PCDHB13Q9Y5F0 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
PCDHB13Q9Y5F0 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC26.61■■□□□ 1.85
PCDHB13Q9Y5F0 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC26.61■■□□□ 1.85
PCDHB13Q9Y5F0 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC26.61■■□□□ 1.85
PCDHB13Q9Y5F0 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
PCDHB13Q9Y5F0 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
PCDHB13Q9Y5F0 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
PCDHB13Q9Y5F0 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
PCDHB13Q9Y5F0 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC26.61■■□□□ 1.85
PCDHB13Q9Y5F0 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC26.61■■□□□ 1.85
PCDHB13Q9Y5F0 AC010501.1-201ENST00000606270 1962 ntBASIC26.6■■□□□ 1.85
PCDHB13Q9Y5F0 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC26.6■■□□□ 1.85
PCDHB13Q9Y5F0 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
PCDHB13Q9Y5F0 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC26.6■■□□□ 1.85
PCDHB13Q9Y5F0 AC133552.2-201ENST00000619106 1032 ntBASIC26.6■■□□□ 1.85
PCDHB13Q9Y5F0 HYI-213ENST00000583037 1322 ntTSL 5 BASIC26.6■■□□□ 1.85
PCDHB13Q9Y5F0 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
PCDHB13Q9Y5F0 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
PCDHB13Q9Y5F0 AC009831.1-201ENST00000580420 1582 ntBASIC26.59■■□□□ 1.85
PCDHB13Q9Y5F0 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC26.59■■□□□ 1.85
PCDHB13Q9Y5F0 HES4-204ENST00000484667 667 ntTSL 3 BASIC26.59■■□□□ 1.85
PCDHB13Q9Y5F0 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
PCDHB13Q9Y5F0 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
PCDHB13Q9Y5F0 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC26.58■■□□□ 1.85
PCDHB13Q9Y5F0 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC26.58■■□□□ 1.85
PCDHB13Q9Y5F0 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
PCDHB13Q9Y5F0 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
PCDHB13Q9Y5F0 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC26.58■■□□□ 1.85
PCDHB13Q9Y5F0 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.84
PCDHB13Q9Y5F0 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.84
PCDHB13Q9Y5F0 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
PCDHB13Q9Y5F0 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC26.57■■□□□ 1.84
PCDHB13Q9Y5F0 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
PCDHB13Q9Y5F0 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC26.56■■□□□ 1.84
PCDHB13Q9Y5F0 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC26.56■■□□□ 1.84
PCDHB13Q9Y5F0 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC26.56■■□□□ 1.84
PCDHB13Q9Y5F0 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC26.56■■□□□ 1.84
PCDHB13Q9Y5F0 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC26.56■■□□□ 1.84
PCDHB13Q9Y5F0 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
PCDHB13Q9Y5F0 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC26.55■■□□□ 1.84
PCDHB13Q9Y5F0 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
PCDHB13Q9Y5F0 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC26.54■■□□□ 1.84
PCDHB13Q9Y5F0 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC26.54■■□□□ 1.84
PCDHB13Q9Y5F0 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC26.54■■□□□ 1.84
PCDHB13Q9Y5F0 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
PCDHB13Q9Y5F0 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC26.54■■□□□ 1.84
PCDHB13Q9Y5F0 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
PCDHB13Q9Y5F0 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
PCDHB13Q9Y5F0 ABHD17AP5-201ENST00000580133 923 ntBASIC26.53■■□□□ 1.84
PCDHB13Q9Y5F0 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms