Protein–RNA interactions for Protein: Q9UQ90

SPG7, Paraplegin, humanhuman

Predictions only

Length 795 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7Q9UQ90 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC32.04■■■□□ 2.72
SPG7Q9UQ90 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC32.03■■■□□ 2.72
SPG7Q9UQ90 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC32.03■■■□□ 2.72
SPG7Q9UQ90 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC32.03■■■□□ 2.72
SPG7Q9UQ90 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC32.03■■■□□ 2.72
SPG7Q9UQ90 THA1P-201ENST00000590384 1145 ntBASIC32.03■■■□□ 2.72
SPG7Q9UQ90 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC32.02■■■□□ 2.72
SPG7Q9UQ90 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC32.02■■■□□ 2.72
SPG7Q9UQ90 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC32.02■■■□□ 2.72
SPG7Q9UQ90 RNF146-205ENST00000477776 762 ntTSL 3 BASIC32.02■■■□□ 2.72
SPG7Q9UQ90 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC32.01■■■□□ 2.71
SPG7Q9UQ90 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC32.01■■■□□ 2.71
SPG7Q9UQ90 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC32.01■■■□□ 2.71
SPG7Q9UQ90 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC32■■■□□ 2.71
SPG7Q9UQ90 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC32■■■□□ 2.71
SPG7Q9UQ90 TK2-216ENST00000564917 1156 ntTSL 3 BASIC32■■■□□ 2.71
SPG7Q9UQ90 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC31.99■■■□□ 2.71
SPG7Q9UQ90 KRT18P10-201ENST00000388836 1287 ntBASIC31.99■■■□□ 2.71
SPG7Q9UQ90 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC31.99■■■□□ 2.71
SPG7Q9UQ90 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC31.98■■■□□ 2.71
SPG7Q9UQ90 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC31.98■■■□□ 2.71
SPG7Q9UQ90 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC31.98■■■□□ 2.71
SPG7Q9UQ90 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC31.98■■■□□ 2.71
SPG7Q9UQ90 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC31.98■■■□□ 2.71
SPG7Q9UQ90 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC31.98■■■□□ 2.71
SPG7Q9UQ90 LINC01003-201ENST00000564834 1764 ntBASIC31.98■■■□□ 2.71
SPG7Q9UQ90 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC31.97■■■□□ 2.71
SPG7Q9UQ90 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC31.97■■■□□ 2.71
SPG7Q9UQ90 AC239859.2-201ENST00000444165 318 ntBASIC31.97■■■□□ 2.71
SPG7Q9UQ90 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC31.97■■■□□ 2.71
SPG7Q9UQ90 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC31.97■■■□□ 2.71
SPG7Q9UQ90 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC31.97■■■□□ 2.71
SPG7Q9UQ90 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC31.96■■■□□ 2.71
SPG7Q9UQ90 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC31.96■■■□□ 2.71
SPG7Q9UQ90 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC31.96■■■□□ 2.71
SPG7Q9UQ90 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC31.96■■■□□ 2.71
SPG7Q9UQ90 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC31.96■■■□□ 2.71
SPG7Q9UQ90 AL356441.2-201ENST00000443009 864 ntBASIC31.95■■■□□ 2.71
SPG7Q9UQ90 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC31.95■■■□□ 2.71
SPG7Q9UQ90 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC31.95■■■□□ 2.71
SPG7Q9UQ90 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC31.95■■■□□ 2.7
SPG7Q9UQ90 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC31.94■■■□□ 2.7
SPG7Q9UQ90 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC31.94■■■□□ 2.7
SPG7Q9UQ90 Z92544.1-202ENST00000571933 1220 ntBASIC31.94■■■□□ 2.7
SPG7Q9UQ90 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC31.94■■■□□ 2.7
SPG7Q9UQ90 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC31.94■■■□□ 2.7
SPG7Q9UQ90 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC31.94■■■□□ 2.7
SPG7Q9UQ90 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC31.94■■■□□ 2.7
SPG7Q9UQ90 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC31.93■■■□□ 2.7
SPG7Q9UQ90 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC31.93■■■□□ 2.7
SPG7Q9UQ90 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC31.93■■■□□ 2.7
SPG7Q9UQ90 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC31.93■■■□□ 2.7
SPG7Q9UQ90 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC31.93■■■□□ 2.7
SPG7Q9UQ90 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC31.92■■■□□ 2.7
SPG7Q9UQ90 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC31.92■■■□□ 2.7
SPG7Q9UQ90 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC31.91■■■□□ 2.7
SPG7Q9UQ90 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC31.91■■■□□ 2.7
SPG7Q9UQ90 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC31.91■■■□□ 2.7
SPG7Q9UQ90 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC31.91■■■□□ 2.7
SPG7Q9UQ90 AC139426.1-201ENST00000568218 2529 ntBASIC31.91■■■□□ 2.7
SPG7Q9UQ90 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC31.91■■■□□ 2.7
SPG7Q9UQ90 AC022616.5-201ENST00000518796 181 ntBASIC31.9■■■□□ 2.7
SPG7Q9UQ90 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC31.9■■■□□ 2.7
SPG7Q9UQ90 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC31.9■■■□□ 2.7
SPG7Q9UQ90 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC31.9■■■□□ 2.7
SPG7Q9UQ90 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC31.9■■■□□ 2.7
SPG7Q9UQ90 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC31.9■■■□□ 2.7
SPG7Q9UQ90 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC31.9■■■□□ 2.7
SPG7Q9UQ90 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.7
SPG7Q9UQ90 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC31.89■■■□□ 2.7
SPG7Q9UQ90 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.7
SPG7Q9UQ90 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.7
SPG7Q9UQ90 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC31.89■■■□□ 2.7
SPG7Q9UQ90 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.7
SPG7Q9UQ90 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC31.89■■■□□ 2.7
SPG7Q9UQ90 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC31.88■■■□□ 2.69
SPG7Q9UQ90 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC31.88■■■□□ 2.69
SPG7Q9UQ90 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC31.88■■■□□ 2.69
SPG7Q9UQ90 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC31.87■■■□□ 2.69
SPG7Q9UQ90 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC31.87■■■□□ 2.69
SPG7Q9UQ90 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC31.87■■■□□ 2.69
SPG7Q9UQ90 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC31.87■■■□□ 2.69
SPG7Q9UQ90 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC31.87■■■□□ 2.69
SPG7Q9UQ90 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC31.87■■■□□ 2.69
SPG7Q9UQ90 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC31.87■■■□□ 2.69
SPG7Q9UQ90 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC31.87■■■□□ 2.69
SPG7Q9UQ90 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC31.86■■■□□ 2.69
SPG7Q9UQ90 MTURN-203ENST00000409688 843 ntTSL 2 BASIC31.86■■■□□ 2.69
SPG7Q9UQ90 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC31.86■■■□□ 2.69
SPG7Q9UQ90 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC31.86■■■□□ 2.69
SPG7Q9UQ90 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC31.85■■■□□ 2.69
SPG7Q9UQ90 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC31.85■■■□□ 2.69
SPG7Q9UQ90 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC31.85■■■□□ 2.69
SPG7Q9UQ90 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC31.85■■■□□ 2.69
SPG7Q9UQ90 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC31.84■■■□□ 2.69
SPG7Q9UQ90 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
SPG7Q9UQ90 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
SPG7Q9UQ90 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC31.84■■■□□ 2.69
SPG7Q9UQ90 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
SPG7Q9UQ90 BX255925.1-201ENST00000566954 1854 ntBASIC31.84■■■□□ 2.69
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms