Protein–RNA interactions for Protein: Q9NTJ3

SMC4, Structural maintenance of chromosomes protein 4, humanhuman

Predictions only

Length 1,288 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4Q9NTJ3 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC31.15■■■□□ 2.58
SMC4Q9NTJ3 RP9P-202ENST00000450133 1212 ntBASIC31.14■■■□□ 2.58
SMC4Q9NTJ3 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC31.14■■■□□ 2.58
SMC4Q9NTJ3 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC31.14■■■□□ 2.57
SMC4Q9NTJ3 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
SMC4Q9NTJ3 DUSP8P4-201ENST00000399538 1761 ntBASIC31.13■■■□□ 2.57
SMC4Q9NTJ3 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
SMC4Q9NTJ3 SHF-207ENST00000560540 2062 ntTSL 5 BASIC31.13■■■□□ 2.57
SMC4Q9NTJ3 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
SMC4Q9NTJ3 AC093536.1-201ENST00000569153 554 ntBASIC31.12■■■□□ 2.57
SMC4Q9NTJ3 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC31.12■■■□□ 2.57
SMC4Q9NTJ3 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC31.12■■■□□ 2.57
SMC4Q9NTJ3 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
SMC4Q9NTJ3 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
SMC4Q9NTJ3 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
SMC4Q9NTJ3 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC31.11■■■□□ 2.57
SMC4Q9NTJ3 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
SMC4Q9NTJ3 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC31.11■■■□□ 2.57
SMC4Q9NTJ3 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC31.1■■■□□ 2.57
SMC4Q9NTJ3 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC31.1■■■□□ 2.57
SMC4Q9NTJ3 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC31.1■■■□□ 2.57
SMC4Q9NTJ3 RARRES2P2-201ENST00000394842 485 ntBASIC31.1■■■□□ 2.57
SMC4Q9NTJ3 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC31.1■■■□□ 2.57
SMC4Q9NTJ3 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC31.09■■■□□ 2.57
SMC4Q9NTJ3 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC31.09■■■□□ 2.57
SMC4Q9NTJ3 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
SMC4Q9NTJ3 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
SMC4Q9NTJ3 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC31.08■■■□□ 2.57
SMC4Q9NTJ3 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC31.07■■■□□ 2.56
SMC4Q9NTJ3 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC31.07■■■□□ 2.56
SMC4Q9NTJ3 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
SMC4Q9NTJ3 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC31.07■■■□□ 2.56
SMC4Q9NTJ3 AC010501.1-201ENST00000606270 1962 ntBASIC31.06■■■□□ 2.56
SMC4Q9NTJ3 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
SMC4Q9NTJ3 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
SMC4Q9NTJ3 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC31.06■■■□□ 2.56
SMC4Q9NTJ3 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
SMC4Q9NTJ3 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC31.05■■■□□ 2.56
SMC4Q9NTJ3 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC31.05■■■□□ 2.56
SMC4Q9NTJ3 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC31.05■■■□□ 2.56
SMC4Q9NTJ3 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC31.05■■■□□ 2.56
SMC4Q9NTJ3 BRD4-212ENST00000630599 726 ntTSL 2 BASIC31.05■■■□□ 2.56
SMC4Q9NTJ3 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
SMC4Q9NTJ3 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC31.05■■■□□ 2.56
SMC4Q9NTJ3 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC31.05■■■□□ 2.56
SMC4Q9NTJ3 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC31.04■■■□□ 2.56
SMC4Q9NTJ3 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
SMC4Q9NTJ3 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC31.04■■■□□ 2.56
SMC4Q9NTJ3 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
SMC4Q9NTJ3 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC31.03■■■□□ 2.56
SMC4Q9NTJ3 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC31.03■■■□□ 2.56
SMC4Q9NTJ3 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC31.03■■■□□ 2.56
SMC4Q9NTJ3 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC31.02■■■□□ 2.56
SMC4Q9NTJ3 GFER-205ENST00000569451 517 ntTSL 5 BASIC31.02■■■□□ 2.56
SMC4Q9NTJ3 AC026202.3-201ENST00000600805 1127 ntBASIC31.02■■■□□ 2.56
SMC4Q9NTJ3 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC31.02■■■□□ 2.56
SMC4Q9NTJ3 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC31.01■■■□□ 2.55
SMC4Q9NTJ3 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC31.01■■■□□ 2.55
SMC4Q9NTJ3 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC31.01■■■□□ 2.55
SMC4Q9NTJ3 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.55
SMC4Q9NTJ3 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC31■■■□□ 2.55
SMC4Q9NTJ3 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC31■■■□□ 2.55
SMC4Q9NTJ3 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC31■■■□□ 2.55
SMC4Q9NTJ3 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC31■■■□□ 2.55
SMC4Q9NTJ3 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC31■■■□□ 2.55
SMC4Q9NTJ3 RAP2CP1-202ENST00000605179 643 ntBASIC31■■■□□ 2.55
SMC4Q9NTJ3 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC31■■■□□ 2.55
SMC4Q9NTJ3 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC30.99■■■□□ 2.55
SMC4Q9NTJ3 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC30.99■■■□□ 2.55
SMC4Q9NTJ3 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC30.99■■■□□ 2.55
SMC4Q9NTJ3 AC096887.2-201ENST00000623443 1957 ntBASIC30.99■■■□□ 2.55
SMC4Q9NTJ3 AC009831.1-201ENST00000580420 1582 ntBASIC30.98■■■□□ 2.55
SMC4Q9NTJ3 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC30.98■■■□□ 2.55
SMC4Q9NTJ3 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC30.98■■■□□ 2.55
SMC4Q9NTJ3 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
SMC4Q9NTJ3 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC30.97■■■□□ 2.55
SMC4Q9NTJ3 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC30.97■■■□□ 2.55
SMC4Q9NTJ3 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC30.97■■■□□ 2.55
SMC4Q9NTJ3 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC30.96■■■□□ 2.55
SMC4Q9NTJ3 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC30.96■■■□□ 2.55
SMC4Q9NTJ3 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC30.96■■■□□ 2.55
SMC4Q9NTJ3 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC30.96■■■□□ 2.55
SMC4Q9NTJ3 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC30.95■■■□□ 2.55
SMC4Q9NTJ3 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC30.95■■■□□ 2.55
SMC4Q9NTJ3 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC30.95■■■□□ 2.55
SMC4Q9NTJ3 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC30.95■■■□□ 2.54
SMC4Q9NTJ3 HYI-213ENST00000583037 1322 ntTSL 5 BASIC30.95■■■□□ 2.54
SMC4Q9NTJ3 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC30.95■■■□□ 2.54
SMC4Q9NTJ3 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC30.94■■■□□ 2.54
SMC4Q9NTJ3 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC30.94■■■□□ 2.54
SMC4Q9NTJ3 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC30.94■■■□□ 2.54
SMC4Q9NTJ3 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC30.93■■■□□ 2.54
SMC4Q9NTJ3 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC30.93■■■□□ 2.54
SMC4Q9NTJ3 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC30.93■■■□□ 2.54
SMC4Q9NTJ3 AC133552.2-201ENST00000619106 1032 ntBASIC30.93■■■□□ 2.54
SMC4Q9NTJ3 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC30.93■■■□□ 2.54
SMC4Q9NTJ3 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC30.93■■■□□ 2.54
SMC4Q9NTJ3 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC30.92■■■□□ 2.54
SMC4Q9NTJ3 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
SMC4Q9NTJ3 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC30.92■■■□□ 2.54
Retrieved 100 of 98,524 protein–RNA pairs in 54.6 ms