Protein–RNA interactions for Protein: Q9H1E3

NUCKS1, Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1, humanhuman

Known RBP Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1Q9H1E3 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC26.16■■□□□ 1.78
NUCKS1Q9H1E3 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
NUCKS1Q9H1E3 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
NUCKS1Q9H1E3 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
NUCKS1Q9H1E3 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
NUCKS1Q9H1E3 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
NUCKS1Q9H1E3 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
NUCKS1Q9H1E3 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
NUCKS1Q9H1E3 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC26.15■■□□□ 1.78
NUCKS1Q9H1E3 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC26.15■■□□□ 1.78
NUCKS1Q9H1E3 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC26.15■■□□□ 1.78
NUCKS1Q9H1E3 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
NUCKS1Q9H1E3 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
NUCKS1Q9H1E3 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
NUCKS1Q9H1E3 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
NUCKS1Q9H1E3 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC26.14■■□□□ 1.78
NUCKS1Q9H1E3 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
NUCKS1Q9H1E3 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC26.14■■□□□ 1.78
NUCKS1Q9H1E3 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
NUCKS1Q9H1E3 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC26.14■■□□□ 1.78
NUCKS1Q9H1E3 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC26.14■■□□□ 1.78
NUCKS1Q9H1E3 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC26.14■■□□□ 1.77
NUCKS1Q9H1E3 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC26.14■■□□□ 1.77
NUCKS1Q9H1E3 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC26.13■■□□□ 1.77
NUCKS1Q9H1E3 AL359504.2-201ENST00000605506 1601 ntBASIC26.13■■□□□ 1.77
NUCKS1Q9H1E3 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC26.12■■□□□ 1.77
NUCKS1Q9H1E3 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
NUCKS1Q9H1E3 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC26.12■■□□□ 1.77
NUCKS1Q9H1E3 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC26.12■■□□□ 1.77
NUCKS1Q9H1E3 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC26.12■■□□□ 1.77
NUCKS1Q9H1E3 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC26.12■■□□□ 1.77
NUCKS1Q9H1E3 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC26.12■■□□□ 1.77
NUCKS1Q9H1E3 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
NUCKS1Q9H1E3 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
NUCKS1Q9H1E3 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC26.11■■□□□ 1.77
NUCKS1Q9H1E3 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC26.11■■□□□ 1.77
NUCKS1Q9H1E3 AC142381.3-201ENST00000568208 1670 ntBASIC26.11■■□□□ 1.77
NUCKS1Q9H1E3 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC26.1■■□□□ 1.77
NUCKS1Q9H1E3 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC26.1■■□□□ 1.77
NUCKS1Q9H1E3 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
NUCKS1Q9H1E3 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
NUCKS1Q9H1E3 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC26.09■■□□□ 1.77
NUCKS1Q9H1E3 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
NUCKS1Q9H1E3 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC26.09■■□□□ 1.77
NUCKS1Q9H1E3 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC26.09■■□□□ 1.77
NUCKS1Q9H1E3 SRP68-213ENST00000629930 165 ntTSL 5 BASIC26.09■■□□□ 1.77
NUCKS1Q9H1E3 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
NUCKS1Q9H1E3 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC26.09■■□□□ 1.77
NUCKS1Q9H1E3 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC26.09■■□□□ 1.77
NUCKS1Q9H1E3 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC26.09■■□□□ 1.77
NUCKS1Q9H1E3 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
NUCKS1Q9H1E3 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
NUCKS1Q9H1E3 AC096887.2-201ENST00000623443 1957 ntBASIC26.08■■□□□ 1.77
NUCKS1Q9H1E3 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
NUCKS1Q9H1E3 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
NUCKS1Q9H1E3 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC26.07■■□□□ 1.76
NUCKS1Q9H1E3 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC26.07■■□□□ 1.76
NUCKS1Q9H1E3 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC26.07■■□□□ 1.76
NUCKS1Q9H1E3 AC126177.7-201ENST00000547904 679 ntBASIC26.07■■□□□ 1.76
NUCKS1Q9H1E3 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC26.07■■□□□ 1.76
NUCKS1Q9H1E3 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
NUCKS1Q9H1E3 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
NUCKS1Q9H1E3 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC26.06■■□□□ 1.76
NUCKS1Q9H1E3 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC26.05■■□□□ 1.76
NUCKS1Q9H1E3 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC26.05■■□□□ 1.76
NUCKS1Q9H1E3 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC26.05■■□□□ 1.76
NUCKS1Q9H1E3 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC26.05■■□□□ 1.76
NUCKS1Q9H1E3 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC26.05■■□□□ 1.76
NUCKS1Q9H1E3 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
NUCKS1Q9H1E3 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC26.04■■□□□ 1.76
NUCKS1Q9H1E3 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
NUCKS1Q9H1E3 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC26.04■■□□□ 1.76
NUCKS1Q9H1E3 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
NUCKS1Q9H1E3 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
NUCKS1Q9H1E3 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC26.04■■□□□ 1.76
NUCKS1Q9H1E3 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC26.04■■□□□ 1.76
NUCKS1Q9H1E3 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
NUCKS1Q9H1E3 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
NUCKS1Q9H1E3 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC26.04■■□□□ 1.76
NUCKS1Q9H1E3 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
NUCKS1Q9H1E3 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC26.03■■□□□ 1.76
NUCKS1Q9H1E3 MED25-210ENST00000612854 801 ntTSL 5 BASIC26.03■■□□□ 1.76
NUCKS1Q9H1E3 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
NUCKS1Q9H1E3 MED25-214ENST00000622402 642 ntTSL 5 BASIC26.03■■□□□ 1.76
NUCKS1Q9H1E3 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
NUCKS1Q9H1E3 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
NUCKS1Q9H1E3 TPT1-202ENST00000379055 948 ntTSL 2 BASIC26.02■■□□□ 1.76
NUCKS1Q9H1E3 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
NUCKS1Q9H1E3 ABHD17AP3-201ENST00000503096 1137 ntBASIC26.02■■□□□ 1.76
NUCKS1Q9H1E3 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC26.02■■□□□ 1.76
NUCKS1Q9H1E3 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
NUCKS1Q9H1E3 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
NUCKS1Q9H1E3 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
NUCKS1Q9H1E3 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
NUCKS1Q9H1E3 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
NUCKS1Q9H1E3 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC26.02■■□□□ 1.76
NUCKS1Q9H1E3 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC26.02■■□□□ 1.76
NUCKS1Q9H1E3 AC093323.1-202ENST00000635031 2045 ntBASIC26.02■■□□□ 1.76
NUCKS1Q9H1E3 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
NUCKS1Q9H1E3 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms