Protein–RNA interactions for Protein: Q9ERD7

Tubb3, Tubulin beta-3 chain, mousemouse

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubb3Q9ERD7 Gm9910-201ENSMUST00000195385 1550 ntBASIC21.8■■□□□ 1.08
Tubb3Q9ERD7 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC21.8■■□□□ 1.08
Tubb3Q9ERD7 Gm12366-201ENSMUST00000121722 873 ntBASIC21.8■■□□□ 1.08
Tubb3Q9ERD7 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC21.8■■□□□ 1.08
Tubb3Q9ERD7 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC21.8■■□□□ 1.08
Tubb3Q9ERD7 Gm5786-201ENSMUST00000085368 882 ntBASIC21.8■■□□□ 1.08
Tubb3Q9ERD7 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Tubb3Q9ERD7 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Tubb3Q9ERD7 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Tubb3Q9ERD7 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC21.79■■□□□ 1.08
Tubb3Q9ERD7 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
Tubb3Q9ERD7 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Tubb3Q9ERD7 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Tubb3Q9ERD7 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
Tubb3Q9ERD7 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC21.79■■□□□ 1.08
Tubb3Q9ERD7 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Tubb3Q9ERD7 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
Tubb3Q9ERD7 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Tubb3Q9ERD7 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Tubb3Q9ERD7 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Tubb3Q9ERD7 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Tubb3Q9ERD7 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Tubb3Q9ERD7 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Tubb3Q9ERD7 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC21.77■■□□□ 1.08
Tubb3Q9ERD7 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Tubb3Q9ERD7 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
Tubb3Q9ERD7 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC21.77■■□□□ 1.08
Tubb3Q9ERD7 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
Tubb3Q9ERD7 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Tubb3Q9ERD7 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC21.77■■□□□ 1.08
Tubb3Q9ERD7 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
Tubb3Q9ERD7 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Tubb3Q9ERD7 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Tubb3Q9ERD7 Gm27502-201ENSMUST00000183495 199 ntBASIC21.76■■□□□ 1.07
Tubb3Q9ERD7 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Tubb3Q9ERD7 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Tubb3Q9ERD7 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Tubb3Q9ERD7 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Tubb3Q9ERD7 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC21.74■■□□□ 1.07
Tubb3Q9ERD7 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
Tubb3Q9ERD7 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Tubb3Q9ERD7 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Tubb3Q9ERD7 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Tubb3Q9ERD7 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Tubb3Q9ERD7 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Tubb3Q9ERD7 AC153911.1-201ENSMUST00000220378 758 ntBASIC21.73■■□□□ 1.07
Tubb3Q9ERD7 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC21.73■■□□□ 1.07
Tubb3Q9ERD7 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Tubb3Q9ERD7 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Tubb3Q9ERD7 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Tubb3Q9ERD7 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
Tubb3Q9ERD7 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Tubb3Q9ERD7 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
Tubb3Q9ERD7 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Tubb3Q9ERD7 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Tubb3Q9ERD7 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Tubb3Q9ERD7 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Tubb3Q9ERD7 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
Tubb3Q9ERD7 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Tubb3Q9ERD7 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Tubb3Q9ERD7 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Tubb3Q9ERD7 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
Tubb3Q9ERD7 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Tubb3Q9ERD7 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC21.71■■□□□ 1.07
Tubb3Q9ERD7 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Tubb3Q9ERD7 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.07
Tubb3Q9ERD7 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Tubb3Q9ERD7 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Tubb3Q9ERD7 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC21.7■■□□□ 1.06
Tubb3Q9ERD7 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Tubb3Q9ERD7 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Tubb3Q9ERD7 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Tubb3Q9ERD7 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Tubb3Q9ERD7 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Tubb3Q9ERD7 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Tubb3Q9ERD7 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC21.69■■□□□ 1.06
Tubb3Q9ERD7 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Tubb3Q9ERD7 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Tubb3Q9ERD7 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Tubb3Q9ERD7 Gm38160-201ENSMUST00000193090 2499 ntBASIC21.68■■□□□ 1.06
Tubb3Q9ERD7 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC21.68■■□□□ 1.06
Tubb3Q9ERD7 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC21.68■■□□□ 1.06
Tubb3Q9ERD7 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Tubb3Q9ERD7 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Tubb3Q9ERD7 Terc-201ENSMUST00000082862 423 ntBASIC21.68■■□□□ 1.06
Tubb3Q9ERD7 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
Tubb3Q9ERD7 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Tubb3Q9ERD7 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Tubb3Q9ERD7 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Tubb3Q9ERD7 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Tubb3Q9ERD7 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Tubb3Q9ERD7 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Tubb3Q9ERD7 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Tubb3Q9ERD7 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Tubb3Q9ERD7 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
Tubb3Q9ERD7 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Tubb3Q9ERD7 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Tubb3Q9ERD7 Gm7332-201ENSMUST00000118351 454 ntBASIC21.65■■□□□ 1.06
Tubb3Q9ERD7 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Tubb3Q9ERD7 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Retrieved 100 of 76,532 protein–RNA pairs in 542.7 ms