Protein–RNA interactions for Protein: Q9CY16

Mrps28, 28S ribosomal protein S28, mitochondrial, mousemouse

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mrps28Q9CY16 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Mrps28Q9CY16 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Mrps28Q9CY16 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Mrps28Q9CY16 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC19.72■□□□□ 0.75
Mrps28Q9CY16 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Mrps28Q9CY16 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Mrps28Q9CY16 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Mrps28Q9CY16 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Mrps28Q9CY16 AC153524.1-201ENSMUST00000220436 1935 ntBASIC19.72■□□□□ 0.75
Mrps28Q9CY16 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Mrps28Q9CY16 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Mrps28Q9CY16 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Mrps28Q9CY16 Gm7332-201ENSMUST00000118351 454 ntBASIC19.71■□□□□ 0.75
Mrps28Q9CY16 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Mrps28Q9CY16 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Mrps28Q9CY16 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC19.71■□□□□ 0.75
Mrps28Q9CY16 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Mrps28Q9CY16 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Mrps28Q9CY16 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Mrps28Q9CY16 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC19.7■□□□□ 0.74
Mrps28Q9CY16 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC19.7■□□□□ 0.74
Mrps28Q9CY16 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC19.7■□□□□ 0.74
Mrps28Q9CY16 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Mrps28Q9CY16 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Mrps28Q9CY16 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Mrps28Q9CY16 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Mrps28Q9CY16 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC19.69■□□□□ 0.74
Mrps28Q9CY16 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Mrps28Q9CY16 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC19.68■□□□□ 0.74
Mrps28Q9CY16 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Mrps28Q9CY16 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Mrps28Q9CY16 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Mrps28Q9CY16 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Mrps28Q9CY16 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC19.68■□□□□ 0.74
Mrps28Q9CY16 Gm12366-201ENSMUST00000121722 873 ntBASIC19.68■□□□□ 0.74
Mrps28Q9CY16 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Mrps28Q9CY16 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC19.68■□□□□ 0.74
Mrps28Q9CY16 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC19.68■□□□□ 0.74
Mrps28Q9CY16 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Mrps28Q9CY16 Gm5786-201ENSMUST00000085368 882 ntBASIC19.68■□□□□ 0.74
Mrps28Q9CY16 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Mrps28Q9CY16 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Mrps28Q9CY16 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC19.67■□□□□ 0.74
Mrps28Q9CY16 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Mrps28Q9CY16 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC19.67■□□□□ 0.74
Mrps28Q9CY16 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Mrps28Q9CY16 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Mrps28Q9CY16 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Mrps28Q9CY16 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC19.67■□□□□ 0.74
Mrps28Q9CY16 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Mrps28Q9CY16 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC19.66■□□□□ 0.74
Mrps28Q9CY16 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC19.66■□□□□ 0.74
Mrps28Q9CY16 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Mrps28Q9CY16 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Mrps28Q9CY16 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Mrps28Q9CY16 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Mrps28Q9CY16 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Mrps28Q9CY16 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC19.65■□□□□ 0.74
Mrps28Q9CY16 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Mrps28Q9CY16 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Mrps28Q9CY16 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Mrps28Q9CY16 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Mrps28Q9CY16 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Mrps28Q9CY16 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Mrps28Q9CY16 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Mrps28Q9CY16 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Mrps28Q9CY16 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Mrps28Q9CY16 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC19.64■□□□□ 0.74
Mrps28Q9CY16 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Mrps28Q9CY16 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.74
Mrps28Q9CY16 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Mrps28Q9CY16 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC19.64■□□□□ 0.73
Mrps28Q9CY16 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Mrps28Q9CY16 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
Mrps28Q9CY16 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Mrps28Q9CY16 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC19.63■□□□□ 0.73
Mrps28Q9CY16 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Mrps28Q9CY16 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Mrps28Q9CY16 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Mrps28Q9CY16 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Mrps28Q9CY16 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Mrps28Q9CY16 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Mrps28Q9CY16 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Mrps28Q9CY16 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Mrps28Q9CY16 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Mrps28Q9CY16 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Mrps28Q9CY16 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
Mrps28Q9CY16 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC19.61■□□□□ 0.73
Mrps28Q9CY16 Gm22567-201ENSMUST00000175542 342 ntBASIC19.61■□□□□ 0.73
Mrps28Q9CY16 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC19.61■□□□□ 0.73
Mrps28Q9CY16 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Mrps28Q9CY16 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
Mrps28Q9CY16 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Mrps28Q9CY16 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Mrps28Q9CY16 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Mrps28Q9CY16 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Mrps28Q9CY16 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Mrps28Q9CY16 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Mrps28Q9CY16 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Mrps28Q9CY16 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 175.4 ms