Protein–RNA interactions for Protein: Q99958

FOXC2, Forkhead box protein C2, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXC2Q99958 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC20.57■□□□□ 0.88
FOXC2Q99958 AL136116.3-201ENST00000402907 1138 ntBASIC20.57■□□□□ 0.88
FOXC2Q99958 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
FOXC2Q99958 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
FOXC2Q99958 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC20.57■□□□□ 0.88
FOXC2Q99958 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC20.57■□□□□ 0.88
FOXC2Q99958 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
FOXC2Q99958 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
FOXC2Q99958 KRT18P10-201ENST00000388836 1287 ntBASIC20.56■□□□□ 0.88
FOXC2Q99958 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC20.56■□□□□ 0.88
FOXC2Q99958 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC20.56■□□□□ 0.88
FOXC2Q99958 AC005837.3-201ENST00000612163 286 ntBASIC20.56■□□□□ 0.88
FOXC2Q99958 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC20.56■□□□□ 0.88
FOXC2Q99958 AC021242.3-201ENST00000607598 1377 ntBASIC20.56■□□□□ 0.88
FOXC2Q99958 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC20.56■□□□□ 0.88
FOXC2Q99958 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC20.55■□□□□ 0.88
FOXC2Q99958 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
FOXC2Q99958 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC20.55■□□□□ 0.88
FOXC2Q99958 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
FOXC2Q99958 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
FOXC2Q99958 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
FOXC2Q99958 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
FOXC2Q99958 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC20.54■□□□□ 0.88
FOXC2Q99958 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC20.54■□□□□ 0.88
FOXC2Q99958 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
FOXC2Q99958 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
FOXC2Q99958 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
FOXC2Q99958 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC20.53■□□□□ 0.88
FOXC2Q99958 AC110285.6-201ENST00000617652 491 ntBASIC20.53■□□□□ 0.88
FOXC2Q99958 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
FOXC2Q99958 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
FOXC2Q99958 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
FOXC2Q99958 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
FOXC2Q99958 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
FOXC2Q99958 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
FOXC2Q99958 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
FOXC2Q99958 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC20.52■□□□□ 0.88
FOXC2Q99958 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
FOXC2Q99958 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
FOXC2Q99958 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
FOXC2Q99958 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
FOXC2Q99958 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC20.52■□□□□ 0.87
FOXC2Q99958 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
FOXC2Q99958 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
FOXC2Q99958 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC20.51■□□□□ 0.87
FOXC2Q99958 AC133561.4-201ENST00000566112 224 ntBASIC20.51■□□□□ 0.87
FOXC2Q99958 AC092666.2-201ENST00000613287 246 ntBASIC20.51■□□□□ 0.87
FOXC2Q99958 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
FOXC2Q99958 AC092028.1-203ENST00000608262 953 ntBASIC20.5■□□□□ 0.87
FOXC2Q99958 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC20.5■□□□□ 0.87
FOXC2Q99958 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC20.5■□□□□ 0.87
FOXC2Q99958 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
FOXC2Q99958 AP002414.2-202ENST00000590929 1450 ntBASIC20.5■□□□□ 0.87
FOXC2Q99958 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
FOXC2Q99958 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
FOXC2Q99958 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC20.49■□□□□ 0.87
FOXC2Q99958 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC20.49■□□□□ 0.87
FOXC2Q99958 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
FOXC2Q99958 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC20.49■□□□□ 0.87
FOXC2Q99958 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC20.49■□□□□ 0.87
FOXC2Q99958 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC20.49■□□□□ 0.87
FOXC2Q99958 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC20.49■□□□□ 0.87
FOXC2Q99958 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
FOXC2Q99958 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC20.49■□□□□ 0.87
FOXC2Q99958 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
FOXC2Q99958 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
FOXC2Q99958 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
FOXC2Q99958 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
FOXC2Q99958 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC20.48■□□□□ 0.87
FOXC2Q99958 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
FOXC2Q99958 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC20.48■□□□□ 0.87
FOXC2Q99958 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
FOXC2Q99958 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
FOXC2Q99958 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC20.47■□□□□ 0.87
FOXC2Q99958 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC20.47■□□□□ 0.87
FOXC2Q99958 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
FOXC2Q99958 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
FOXC2Q99958 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC20.47■□□□□ 0.87
FOXC2Q99958 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
FOXC2Q99958 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC20.46■□□□□ 0.87
FOXC2Q99958 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC20.46■□□□□ 0.87
FOXC2Q99958 AC096631.2-201ENST00000436136 790 ntBASIC20.46■□□□□ 0.87
FOXC2Q99958 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC20.46■□□□□ 0.87
FOXC2Q99958 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
FOXC2Q99958 AL117332.1-201ENST00000622628 974 ntBASIC20.46■□□□□ 0.87
FOXC2Q99958 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
FOXC2Q99958 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC20.45■□□□□ 0.87
FOXC2Q99958 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC20.45■□□□□ 0.87
FOXC2Q99958 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC20.45■□□□□ 0.86
FOXC2Q99958 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC20.45■□□□□ 0.86
FOXC2Q99958 MIR3621-201ENST00000580529 85 ntBASIC20.45■□□□□ 0.86
FOXC2Q99958 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
FOXC2Q99958 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC20.45■□□□□ 0.86
FOXC2Q99958 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
FOXC2Q99958 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
FOXC2Q99958 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
FOXC2Q99958 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC20.44■□□□□ 0.86
FOXC2Q99958 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC20.44■□□□□ 0.86
FOXC2Q99958 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
FOXC2Q99958 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms