Protein–RNA interactions for Protein: Q99848

EBNA1BP2, Probable rRNA-processing protein EBP2, humanhuman

Known RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBNA1BP2Q99848 MIR3648-2-201ENST00000581792 180 ntBASIC24.45■■□□□ 1.5
EBNA1BP2Q99848 MIR3648-1-201ENST00000615959 180 ntBASIC24.45■■□□□ 1.5
EBNA1BP2Q99848 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC24.45■■□□□ 1.5
EBNA1BP2Q99848 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC24.45■■□□□ 1.5
EBNA1BP2Q99848 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
EBNA1BP2Q99848 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC24.44■■□□□ 1.5
EBNA1BP2Q99848 GDI1-215ENST00000630693 786 ntTSL 4 BASIC24.44■■□□□ 1.5
EBNA1BP2Q99848 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC24.44■■□□□ 1.5
EBNA1BP2Q99848 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
EBNA1BP2Q99848 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
EBNA1BP2Q99848 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
EBNA1BP2Q99848 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC24.44■■□□□ 1.5
EBNA1BP2Q99848 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC24.43■■□□□ 1.5
EBNA1BP2Q99848 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC24.43■■□□□ 1.5
EBNA1BP2Q99848 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
EBNA1BP2Q99848 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC24.43■■□□□ 1.5
EBNA1BP2Q99848 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC24.42■■□□□ 1.5
EBNA1BP2Q99848 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC24.42■■□□□ 1.5
EBNA1BP2Q99848 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC24.42■■□□□ 1.5
EBNA1BP2Q99848 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
EBNA1BP2Q99848 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC24.42■■□□□ 1.5
EBNA1BP2Q99848 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
EBNA1BP2Q99848 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC24.41■■□□□ 1.5
EBNA1BP2Q99848 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC24.41■■□□□ 1.5
EBNA1BP2Q99848 AC126177.7-201ENST00000547904 679 ntBASIC24.41■■□□□ 1.5
EBNA1BP2Q99848 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC24.41■■□□□ 1.5
EBNA1BP2Q99848 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
EBNA1BP2Q99848 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC24.41■■□□□ 1.5
EBNA1BP2Q99848 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
EBNA1BP2Q99848 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
EBNA1BP2Q99848 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC24.4■■□□□ 1.5
EBNA1BP2Q99848 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
EBNA1BP2Q99848 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC24.4■■□□□ 1.5
EBNA1BP2Q99848 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
EBNA1BP2Q99848 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
EBNA1BP2Q99848 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC24.39■■□□□ 1.5
EBNA1BP2Q99848 AC142381.3-201ENST00000568208 1670 ntBASIC24.39■■□□□ 1.49
EBNA1BP2Q99848 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
EBNA1BP2Q99848 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC24.38■■□□□ 1.49
EBNA1BP2Q99848 PKM-204ENST00000449901 2526 ntTSL 2 BASIC24.38■■□□□ 1.49
EBNA1BP2Q99848 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
EBNA1BP2Q99848 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
EBNA1BP2Q99848 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
EBNA1BP2Q99848 METRNL-202ENST00000570778 967 ntTSL 5 BASIC24.37■■□□□ 1.49
EBNA1BP2Q99848 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC24.37■■□□□ 1.49
EBNA1BP2Q99848 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC24.37■■□□□ 1.49
EBNA1BP2Q99848 MED17-227ENST00000640521 2047 ntTSL 5 BASIC24.36■■□□□ 1.49
EBNA1BP2Q99848 AC016575.1-201ENST00000607026 382 ntBASIC24.36■■□□□ 1.49
EBNA1BP2Q99848 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC24.36■■□□□ 1.49
EBNA1BP2Q99848 AC022211.4-201ENST00000625094 2161 ntBASIC24.36■■□□□ 1.49
EBNA1BP2Q99848 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC24.36■■□□□ 1.49
EBNA1BP2Q99848 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC24.36■■□□□ 1.49
EBNA1BP2Q99848 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC24.35■■□□□ 1.49
EBNA1BP2Q99848 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
EBNA1BP2Q99848 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
EBNA1BP2Q99848 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC24.35■■□□□ 1.49
EBNA1BP2Q99848 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
EBNA1BP2Q99848 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
EBNA1BP2Q99848 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC24.34■■□□□ 1.49
EBNA1BP2Q99848 AC093323.1-202ENST00000635031 2045 ntBASIC24.34■■□□□ 1.49
EBNA1BP2Q99848 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC24.34■■□□□ 1.49
EBNA1BP2Q99848 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
EBNA1BP2Q99848 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC24.34■■□□□ 1.49
EBNA1BP2Q99848 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
EBNA1BP2Q99848 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
EBNA1BP2Q99848 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
EBNA1BP2Q99848 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC24.33■■□□□ 1.49
EBNA1BP2Q99848 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
EBNA1BP2Q99848 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
EBNA1BP2Q99848 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
EBNA1BP2Q99848 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC24.33■■□□□ 1.48
EBNA1BP2Q99848 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC24.33■■□□□ 1.48
EBNA1BP2Q99848 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC24.32■■□□□ 1.48
EBNA1BP2Q99848 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC24.32■■□□□ 1.48
EBNA1BP2Q99848 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
EBNA1BP2Q99848 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC24.32■■□□□ 1.48
EBNA1BP2Q99848 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC24.32■■□□□ 1.48
EBNA1BP2Q99848 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC24.32■■□□□ 1.48
EBNA1BP2Q99848 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC24.32■■□□□ 1.48
EBNA1BP2Q99848 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
EBNA1BP2Q99848 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
EBNA1BP2Q99848 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC24.31■■□□□ 1.48
EBNA1BP2Q99848 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
EBNA1BP2Q99848 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC24.31■■□□□ 1.48
EBNA1BP2Q99848 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC24.31■■□□□ 1.48
EBNA1BP2Q99848 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
EBNA1BP2Q99848 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
EBNA1BP2Q99848 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
EBNA1BP2Q99848 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
EBNA1BP2Q99848 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
EBNA1BP2Q99848 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
EBNA1BP2Q99848 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC24.3■■□□□ 1.48
EBNA1BP2Q99848 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
EBNA1BP2Q99848 AC138932.3-201ENST00000567634 1902 ntBASIC24.29■■□□□ 1.48
EBNA1BP2Q99848 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
EBNA1BP2Q99848 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
EBNA1BP2Q99848 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
EBNA1BP2Q99848 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC24.29■■□□□ 1.48
EBNA1BP2Q99848 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
EBNA1BP2Q99848 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC24.29■■□□□ 1.48
Retrieved 100 of 98,524 protein–RNA pairs in 199 ms