Protein–RNA interactions for Protein: Q96TA2

YME1L1, ATP-dependent zinc metalloprotease YME1L1, humanhuman

Predictions only

Length 773 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YME1L1Q96TA2 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
YME1L1Q96TA2 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC26.29■■□□□ 1.8
YME1L1Q96TA2 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC26.29■■□□□ 1.8
YME1L1Q96TA2 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
YME1L1Q96TA2 BX664725.1-201ENST00000438252 379 ntBASIC26.28■■□□□ 1.8
YME1L1Q96TA2 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC26.28■■□□□ 1.8
YME1L1Q96TA2 MIR4787-201ENST00000607364 84 ntBASIC26.28■■□□□ 1.8
YME1L1Q96TA2 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC26.27■■□□□ 1.8
YME1L1Q96TA2 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC26.27■■□□□ 1.8
YME1L1Q96TA2 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC26.27■■□□□ 1.8
YME1L1Q96TA2 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
YME1L1Q96TA2 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
YME1L1Q96TA2 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC26.26■■□□□ 1.79
YME1L1Q96TA2 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC26.26■■□□□ 1.79
YME1L1Q96TA2 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC26.26■■□□□ 1.79
YME1L1Q96TA2 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC26.25■■□□□ 1.79
YME1L1Q96TA2 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
YME1L1Q96TA2 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
YME1L1Q96TA2 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC26.25■■□□□ 1.79
YME1L1Q96TA2 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC26.25■■□□□ 1.79
YME1L1Q96TA2 LSM7-203ENST00000585409 512 ntTSL 2 BASIC26.25■■□□□ 1.79
YME1L1Q96TA2 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC26.25■■□□□ 1.79
YME1L1Q96TA2 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC26.25■■□□□ 1.79
YME1L1Q96TA2 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC26.24■■□□□ 1.79
YME1L1Q96TA2 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC26.24■■□□□ 1.79
YME1L1Q96TA2 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC26.24■■□□□ 1.79
YME1L1Q96TA2 AC022616.5-201ENST00000518796 181 ntBASIC26.24■■□□□ 1.79
YME1L1Q96TA2 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
YME1L1Q96TA2 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC26.24■■□□□ 1.79
YME1L1Q96TA2 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
YME1L1Q96TA2 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
YME1L1Q96TA2 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
YME1L1Q96TA2 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC26.23■■□□□ 1.79
YME1L1Q96TA2 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
YME1L1Q96TA2 KRT18P10-201ENST00000388836 1287 ntBASIC26.23■■□□□ 1.79
YME1L1Q96TA2 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC26.23■■□□□ 1.79
YME1L1Q96TA2 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC26.23■■□□□ 1.79
YME1L1Q96TA2 PROC-203ENST00000409048 1586 ntTSL 5 BASIC26.23■■□□□ 1.79
YME1L1Q96TA2 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
YME1L1Q96TA2 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC26.22■■□□□ 1.79
YME1L1Q96TA2 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC26.22■■□□□ 1.79
YME1L1Q96TA2 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
YME1L1Q96TA2 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC26.22■■□□□ 1.79
YME1L1Q96TA2 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
YME1L1Q96TA2 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
YME1L1Q96TA2 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC26.21■■□□□ 1.79
YME1L1Q96TA2 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
YME1L1Q96TA2 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC26.21■■□□□ 1.79
YME1L1Q96TA2 ABCB10P1-201ENST00000614297 2181 ntBASIC26.2■■□□□ 1.79
YME1L1Q96TA2 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC26.2■■□□□ 1.79
YME1L1Q96TA2 MIR935-201ENST00000401179 91 ntBASIC26.2■■□□□ 1.78
YME1L1Q96TA2 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC26.2■■□□□ 1.78
YME1L1Q96TA2 PEMT-206ENST00000435340 960 ntTSL 5 BASIC26.19■■□□□ 1.78
YME1L1Q96TA2 KRT16P3-201ENST00000439127 1283 ntBASIC26.19■■□□□ 1.78
YME1L1Q96TA2 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC26.18■■□□□ 1.78
YME1L1Q96TA2 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
YME1L1Q96TA2 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC26.18■■□□□ 1.78
YME1L1Q96TA2 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
YME1L1Q96TA2 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC26.18■■□□□ 1.78
YME1L1Q96TA2 UNC93B8-201ENST00000511903 705 ntBASIC26.18■■□□□ 1.78
YME1L1Q96TA2 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
YME1L1Q96TA2 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC26.17■■□□□ 1.78
YME1L1Q96TA2 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
YME1L1Q96TA2 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC26.17■■□□□ 1.78
YME1L1Q96TA2 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC26.17■■□□□ 1.78
YME1L1Q96TA2 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC26.17■■□□□ 1.78
YME1L1Q96TA2 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
YME1L1Q96TA2 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
YME1L1Q96TA2 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
YME1L1Q96TA2 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
YME1L1Q96TA2 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC26.16■■□□□ 1.78
YME1L1Q96TA2 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC26.16■■□□□ 1.78
YME1L1Q96TA2 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC26.16■■□□□ 1.78
YME1L1Q96TA2 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC26.16■■□□□ 1.78
YME1L1Q96TA2 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC26.15■■□□□ 1.78
YME1L1Q96TA2 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
YME1L1Q96TA2 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
YME1L1Q96TA2 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC26.14■■□□□ 1.78
YME1L1Q96TA2 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC26.14■■□□□ 1.78
YME1L1Q96TA2 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC26.14■■□□□ 1.78
YME1L1Q96TA2 KRT18P24-201ENST00000344739 1156 ntBASIC26.14■■□□□ 1.78
YME1L1Q96TA2 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
YME1L1Q96TA2 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC26.14■■□□□ 1.78
YME1L1Q96TA2 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC26.14■■□□□ 1.78
YME1L1Q96TA2 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
YME1L1Q96TA2 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
YME1L1Q96TA2 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
YME1L1Q96TA2 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC26.14■■□□□ 1.77
YME1L1Q96TA2 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
YME1L1Q96TA2 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
YME1L1Q96TA2 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
YME1L1Q96TA2 TSPY9P-201ENST00000440215 945 ntBASIC26.12■■□□□ 1.77
YME1L1Q96TA2 TSPY11P-201ENST00000442607 1045 ntBASIC26.12■■□□□ 1.77
YME1L1Q96TA2 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC26.12■■□□□ 1.77
YME1L1Q96TA2 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC26.12■■□□□ 1.77
YME1L1Q96TA2 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC26.12■■□□□ 1.77
YME1L1Q96TA2 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC26.11■■□□□ 1.77
YME1L1Q96TA2 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC26.11■■□□□ 1.77
YME1L1Q96TA2 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC26.11■■□□□ 1.77
YME1L1Q96TA2 AL449106.1-201ENST00000608517 1980 ntBASIC26.11■■□□□ 1.77
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms