Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CSMD1Q96PZ7 AL117332.1-201ENST00000622628 974 ntBASIC20.93■□□□□ 0.94
CSMD1Q96PZ7 AL135925.1-201ENST00000605920 1701 ntBASIC20.93■□□□□ 0.94
CSMD1Q96PZ7 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CSMD1Q96PZ7 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC20.93■□□□□ 0.94
CSMD1Q96PZ7 AL031432.3-201ENST00000607698 485 ntBASIC20.93■□□□□ 0.94
CSMD1Q96PZ7 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
CSMD1Q96PZ7 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC20.92■□□□□ 0.94
CSMD1Q96PZ7 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC20.92■□□□□ 0.94
CSMD1Q96PZ7 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CSMD1Q96PZ7 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC20.91■□□□□ 0.94
CSMD1Q96PZ7 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC20.91■□□□□ 0.94
CSMD1Q96PZ7 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CSMD1Q96PZ7 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CSMD1Q96PZ7 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC20.91■□□□□ 0.94
CSMD1Q96PZ7 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC20.91■□□□□ 0.94
CSMD1Q96PZ7 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CSMD1Q96PZ7 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
CSMD1Q96PZ7 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC20.9■□□□□ 0.94
CSMD1Q96PZ7 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC20.9■□□□□ 0.94
CSMD1Q96PZ7 BX664725.1-201ENST00000438252 379 ntBASIC20.9■□□□□ 0.94
CSMD1Q96PZ7 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CSMD1Q96PZ7 SRR-208ENST00000576848 588 ntTSL 4 BASIC20.9■□□□□ 0.94
CSMD1Q96PZ7 TSPY9P-201ENST00000440215 945 ntBASIC20.89■□□□□ 0.94
CSMD1Q96PZ7 TSPY11P-201ENST00000442607 1045 ntBASIC20.89■□□□□ 0.94
CSMD1Q96PZ7 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.94
CSMD1Q96PZ7 TK2-202ENST00000417693 1046 ntTSL 2 BASIC20.89■□□□□ 0.93
CSMD1Q96PZ7 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
CSMD1Q96PZ7 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CSMD1Q96PZ7 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC20.88■□□□□ 0.93
CSMD1Q96PZ7 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC20.88■□□□□ 0.93
CSMD1Q96PZ7 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
CSMD1Q96PZ7 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
CSMD1Q96PZ7 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CSMD1Q96PZ7 AC090192.1-201ENST00000517740 490 ntBASIC20.87■□□□□ 0.93
CSMD1Q96PZ7 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
CSMD1Q96PZ7 ST7-202ENST00000323984 2142 ntTSL 5 BASIC20.87■□□□□ 0.93
CSMD1Q96PZ7 ST7-207ENST00000393449 2127 ntTSL 5 BASIC20.87■□□□□ 0.93
CSMD1Q96PZ7 MIR6821-201ENST00000617625 74 ntBASIC20.86■□□□□ 0.93
CSMD1Q96PZ7 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CSMD1Q96PZ7 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CSMD1Q96PZ7 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC20.86■□□□□ 0.93
CSMD1Q96PZ7 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CSMD1Q96PZ7 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC20.85■□□□□ 0.93
CSMD1Q96PZ7 AL512631.2-201ENST00000604634 923 ntBASIC20.85■□□□□ 0.93
CSMD1Q96PZ7 AC092028.1-203ENST00000608262 953 ntBASIC20.85■□□□□ 0.93
CSMD1Q96PZ7 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC20.85■□□□□ 0.93
CSMD1Q96PZ7 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CSMD1Q96PZ7 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CSMD1Q96PZ7 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CSMD1Q96PZ7 SUDS3P1-201ENST00000505831 966 ntBASIC20.85■□□□□ 0.93
CSMD1Q96PZ7 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CSMD1Q96PZ7 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CSMD1Q96PZ7 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC20.84■□□□□ 0.93
CSMD1Q96PZ7 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC20.84■□□□□ 0.93
CSMD1Q96PZ7 ANKRD20A6P-201ENST00000618763 204 ntBASIC20.84■□□□□ 0.93
CSMD1Q96PZ7 LGR4-203ENST00000480977 492 ntTSL 2 BASIC20.84■□□□□ 0.93
CSMD1Q96PZ7 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC20.83■□□□□ 0.93
CSMD1Q96PZ7 AL162430.1-201ENST00000480705 870 ntBASIC20.83■□□□□ 0.93
CSMD1Q96PZ7 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
CSMD1Q96PZ7 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.93
CSMD1Q96PZ7 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CSMD1Q96PZ7 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
CSMD1Q96PZ7 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC20.83■□□□□ 0.92
CSMD1Q96PZ7 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CSMD1Q96PZ7 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
CSMD1Q96PZ7 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC20.82■□□□□ 0.92
CSMD1Q96PZ7 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CSMD1Q96PZ7 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CSMD1Q96PZ7 AC106739.1-201ENST00000617035 715 ntBASIC20.82■□□□□ 0.92
CSMD1Q96PZ7 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CSMD1Q96PZ7 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC20.82■□□□□ 0.92
CSMD1Q96PZ7 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC20.81■□□□□ 0.92
CSMD1Q96PZ7 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
CSMD1Q96PZ7 MIR3621-201ENST00000580529 85 ntBASIC20.81■□□□□ 0.92
CSMD1Q96PZ7 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CSMD1Q96PZ7 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC20.8■□□□□ 0.92
CSMD1Q96PZ7 AC021242.3-201ENST00000607598 1377 ntBASIC20.8■□□□□ 0.92
CSMD1Q96PZ7 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC20.8■□□□□ 0.92
CSMD1Q96PZ7 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CSMD1Q96PZ7 AC022616.5-201ENST00000518796 181 ntBASIC20.8■□□□□ 0.92
CSMD1Q96PZ7 ST7-AS1-201ENST00000456775 1889 ntBASIC20.79■□□□□ 0.92
CSMD1Q96PZ7 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC20.79■□□□□ 0.92
CSMD1Q96PZ7 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC20.79■□□□□ 0.92
CSMD1Q96PZ7 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
CSMD1Q96PZ7 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC20.79■□□□□ 0.92
CSMD1Q96PZ7 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
CSMD1Q96PZ7 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC20.79■□□□□ 0.92
CSMD1Q96PZ7 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CSMD1Q96PZ7 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
CSMD1Q96PZ7 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
CSMD1Q96PZ7 RPS2P7-201ENST00000447334 885 ntBASIC20.79■□□□□ 0.92
CSMD1Q96PZ7 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC20.79■□□□□ 0.92
CSMD1Q96PZ7 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CSMD1Q96PZ7 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC20.78■□□□□ 0.92
CSMD1Q96PZ7 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
CSMD1Q96PZ7 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CSMD1Q96PZ7 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CSMD1Q96PZ7 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CSMD1Q96PZ7 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 78.4 ms