Protein–RNA interactions for Protein: Q96NU0

CNTNAP3B, Contactin-associated protein-like 3B, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3BQ96NU0 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC23.33■■□□□ 1.33
CNTNAP3BQ96NU0 SUDS3P1-201ENST00000505831 966 ntBASIC23.33■■□□□ 1.33
CNTNAP3BQ96NU0 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC23.33■■□□□ 1.33
CNTNAP3BQ96NU0 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC23.33■■□□□ 1.33
CNTNAP3BQ96NU0 AC092028.1-203ENST00000608262 953 ntBASIC23.33■■□□□ 1.33
CNTNAP3BQ96NU0 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC23.33■■□□□ 1.32
CNTNAP3BQ96NU0 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC23.32■■□□□ 1.32
CNTNAP3BQ96NU0 HYI-206ENST00000372434 1025 ntTSL 5 BASIC23.32■■□□□ 1.32
CNTNAP3BQ96NU0 AC097381.1-201ENST00000429019 1296 ntBASIC23.32■■□□□ 1.32
CNTNAP3BQ96NU0 AL356740.2-201ENST00000601559 647 ntBASIC23.32■■□□□ 1.32
CNTNAP3BQ96NU0 AC087623.3-201ENST00000607047 1098 ntBASIC23.32■■□□□ 1.32
CNTNAP3BQ96NU0 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC23.32■■□□□ 1.32
CNTNAP3BQ96NU0 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
CNTNAP3BQ96NU0 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC23.32■■□□□ 1.32
CNTNAP3BQ96NU0 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC23.32■■□□□ 1.32
CNTNAP3BQ96NU0 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
CNTNAP3BQ96NU0 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC23.31■■□□□ 1.32
CNTNAP3BQ96NU0 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC23.31■■□□□ 1.32
CNTNAP3BQ96NU0 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
CNTNAP3BQ96NU0 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC23.31■■□□□ 1.32
CNTNAP3BQ96NU0 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC23.31■■□□□ 1.32
CNTNAP3BQ96NU0 AC137630.3-201ENST00000607245 391 ntBASIC23.31■■□□□ 1.32
CNTNAP3BQ96NU0 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC23.31■■□□□ 1.32
CNTNAP3BQ96NU0 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC23.31■■□□□ 1.32
CNTNAP3BQ96NU0 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
CNTNAP3BQ96NU0 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
CNTNAP3BQ96NU0 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC23.3■■□□□ 1.32
CNTNAP3BQ96NU0 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC23.3■■□□□ 1.32
CNTNAP3BQ96NU0 AL031432.3-201ENST00000607698 485 ntBASIC23.3■■□□□ 1.32
CNTNAP3BQ96NU0 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC23.3■■□□□ 1.32
CNTNAP3BQ96NU0 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC23.3■■□□□ 1.32
CNTNAP3BQ96NU0 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
CNTNAP3BQ96NU0 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
CNTNAP3BQ96NU0 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC23.29■■□□□ 1.32
CNTNAP3BQ96NU0 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC23.29■■□□□ 1.32
CNTNAP3BQ96NU0 DENND3-207ENST00000518347 850 ntTSL 2 BASIC23.29■■□□□ 1.32
CNTNAP3BQ96NU0 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC23.29■■□□□ 1.32
CNTNAP3BQ96NU0 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC23.29■■□□□ 1.32
CNTNAP3BQ96NU0 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
CNTNAP3BQ96NU0 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
CNTNAP3BQ96NU0 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC23.28■■□□□ 1.32
CNTNAP3BQ96NU0 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
CNTNAP3BQ96NU0 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
CNTNAP3BQ96NU0 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC23.28■■□□□ 1.32
CNTNAP3BQ96NU0 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
CNTNAP3BQ96NU0 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
CNTNAP3BQ96NU0 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
CNTNAP3BQ96NU0 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC23.27■■□□□ 1.32
CNTNAP3BQ96NU0 AC105265.2-201ENST00000467189 838 ntBASIC23.27■■□□□ 1.32
CNTNAP3BQ96NU0 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC23.27■■□□□ 1.32
CNTNAP3BQ96NU0 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
CNTNAP3BQ96NU0 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC23.27■■□□□ 1.32
CNTNAP3BQ96NU0 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
CNTNAP3BQ96NU0 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC23.26■■□□□ 1.31
CNTNAP3BQ96NU0 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
CNTNAP3BQ96NU0 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC23.26■■□□□ 1.31
CNTNAP3BQ96NU0 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC23.26■■□□□ 1.31
CNTNAP3BQ96NU0 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
CNTNAP3BQ96NU0 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
CNTNAP3BQ96NU0 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
CNTNAP3BQ96NU0 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC23.25■■□□□ 1.31
CNTNAP3BQ96NU0 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC23.25■■□□□ 1.31
CNTNAP3BQ96NU0 MIR6724-1-201ENST00000616420 92 ntBASIC23.25■■□□□ 1.31
CNTNAP3BQ96NU0 MIR6724-2-201ENST00000616483 92 ntBASIC23.25■■□□□ 1.31
CNTNAP3BQ96NU0 MIR6724-4-201ENST00000617390 92 ntBASIC23.25■■□□□ 1.31
CNTNAP3BQ96NU0 MIR6724-3-201ENST00000622482 92 ntBASIC23.25■■□□□ 1.31
CNTNAP3BQ96NU0 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC23.25■■□□□ 1.31
CNTNAP3BQ96NU0 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC23.25■■□□□ 1.31
CNTNAP3BQ96NU0 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
CNTNAP3BQ96NU0 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC23.24■■□□□ 1.31
CNTNAP3BQ96NU0 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC23.24■■□□□ 1.31
CNTNAP3BQ96NU0 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC23.24■■□□□ 1.31
CNTNAP3BQ96NU0 PLD4-205ENST00000553861 667 ntTSL 2 BASIC23.24■■□□□ 1.31
CNTNAP3BQ96NU0 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
CNTNAP3BQ96NU0 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
CNTNAP3BQ96NU0 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
CNTNAP3BQ96NU0 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC23.23■■□□□ 1.31
CNTNAP3BQ96NU0 AC010997.5-201ENST00000609182 354 ntBASIC23.23■■□□□ 1.31
CNTNAP3BQ96NU0 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
CNTNAP3BQ96NU0 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC23.23■■□□□ 1.31
CNTNAP3BQ96NU0 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
CNTNAP3BQ96NU0 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
CNTNAP3BQ96NU0 QDPR-206ENST00000508623 601 ntTSL 3 BASIC23.22■■□□□ 1.31
CNTNAP3BQ96NU0 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
CNTNAP3BQ96NU0 AL512631.2-201ENST00000604634 923 ntBASIC23.22■■□□□ 1.31
CNTNAP3BQ96NU0 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
CNTNAP3BQ96NU0 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
CNTNAP3BQ96NU0 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC23.21■■□□□ 1.31
CNTNAP3BQ96NU0 MEST-211ENST00000437945 1455 ntTSL 5 BASIC23.21■■□□□ 1.31
CNTNAP3BQ96NU0 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC23.21■■□□□ 1.31
CNTNAP3BQ96NU0 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC23.21■■□□□ 1.31
CNTNAP3BQ96NU0 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
CNTNAP3BQ96NU0 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
CNTNAP3BQ96NU0 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC23.2■■□□□ 1.3
CNTNAP3BQ96NU0 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC23.2■■□□□ 1.3
CNTNAP3BQ96NU0 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
CNTNAP3BQ96NU0 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
CNTNAP3BQ96NU0 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
CNTNAP3BQ96NU0 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
CNTNAP3BQ96NU0 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC23.19■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms