Protein–RNA interactions for Protein: Q96EE3

SEH1L, Nucleoporin SEH1, humanhuman

Predictions only

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEH1LQ96EE3 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
SEH1LQ96EE3 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SEH1LQ96EE3 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
SEH1LQ96EE3 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
SEH1LQ96EE3 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC20.91■□□□□ 0.94
SEH1LQ96EE3 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SEH1LQ96EE3 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
SEH1LQ96EE3 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
SEH1LQ96EE3 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
SEH1LQ96EE3 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SEH1LQ96EE3 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SEH1LQ96EE3 WHAMMP3-201ENST00000611636 1609 ntBASIC20.9■□□□□ 0.94
SEH1LQ96EE3 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SEH1LQ96EE3 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC20.9■□□□□ 0.94
SEH1LQ96EE3 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
SEH1LQ96EE3 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
SEH1LQ96EE3 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
SEH1LQ96EE3 MED25-210ENST00000612854 801 ntTSL 5 BASIC20.89■□□□□ 0.93
SEH1LQ96EE3 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
SEH1LQ96EE3 MED25-214ENST00000622402 642 ntTSL 5 BASIC20.89■□□□□ 0.93
SEH1LQ96EE3 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
SEH1LQ96EE3 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
SEH1LQ96EE3 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SEH1LQ96EE3 THRA-202ENST00000394121 2260 ntTSL 2 BASIC20.88■□□□□ 0.93
SEH1LQ96EE3 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SEH1LQ96EE3 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SEH1LQ96EE3 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
SEH1LQ96EE3 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC20.88■□□□□ 0.93
SEH1LQ96EE3 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
SEH1LQ96EE3 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
SEH1LQ96EE3 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC20.87■□□□□ 0.93
SEH1LQ96EE3 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
SEH1LQ96EE3 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
SEH1LQ96EE3 MIR4449-201ENST00000578365 66 ntBASIC20.87■□□□□ 0.93
SEH1LQ96EE3 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
SEH1LQ96EE3 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SEH1LQ96EE3 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC20.87■□□□□ 0.93
SEH1LQ96EE3 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SEH1LQ96EE3 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SEH1LQ96EE3 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SEH1LQ96EE3 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SEH1LQ96EE3 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SEH1LQ96EE3 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SEH1LQ96EE3 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SEH1LQ96EE3 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC20.86■□□□□ 0.93
SEH1LQ96EE3 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SEH1LQ96EE3 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SEH1LQ96EE3 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
SEH1LQ96EE3 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
SEH1LQ96EE3 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
SEH1LQ96EE3 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
SEH1LQ96EE3 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SEH1LQ96EE3 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SEH1LQ96EE3 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SEH1LQ96EE3 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
SEH1LQ96EE3 LTK-203ENST00000453182 2412 ntTSL 2 BASIC20.85■□□□□ 0.93
SEH1LQ96EE3 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SEH1LQ96EE3 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SEH1LQ96EE3 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SEH1LQ96EE3 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC20.85■□□□□ 0.93
SEH1LQ96EE3 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SEH1LQ96EE3 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC20.85■□□□□ 0.93
SEH1LQ96EE3 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC20.85■□□□□ 0.93
SEH1LQ96EE3 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SEH1LQ96EE3 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SEH1LQ96EE3 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC20.84■□□□□ 0.93
SEH1LQ96EE3 AL359258.2-201ENST00000564063 1566 ntBASIC20.84■□□□□ 0.93
SEH1LQ96EE3 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SEH1LQ96EE3 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
SEH1LQ96EE3 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SEH1LQ96EE3 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
SEH1LQ96EE3 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC20.83■□□□□ 0.92
SEH1LQ96EE3 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
SEH1LQ96EE3 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
SEH1LQ96EE3 AC142381.3-201ENST00000568208 1670 ntBASIC20.83■□□□□ 0.92
SEH1LQ96EE3 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
SEH1LQ96EE3 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
SEH1LQ96EE3 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
SEH1LQ96EE3 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
SEH1LQ96EE3 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SEH1LQ96EE3 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SEH1LQ96EE3 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SEH1LQ96EE3 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
SEH1LQ96EE3 AC010501.1-201ENST00000606270 1962 ntBASIC20.82■□□□□ 0.92
SEH1LQ96EE3 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
SEH1LQ96EE3 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
SEH1LQ96EE3 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SEH1LQ96EE3 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SEH1LQ96EE3 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC20.81■□□□□ 0.92
SEH1LQ96EE3 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SEH1LQ96EE3 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SEH1LQ96EE3 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SEH1LQ96EE3 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SEH1LQ96EE3 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SEH1LQ96EE3 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SEH1LQ96EE3 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC20.8■□□□□ 0.92
SEH1LQ96EE3 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SEH1LQ96EE3 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SEH1LQ96EE3 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC20.8■□□□□ 0.92
SEH1LQ96EE3 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC20.8■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 77.6 ms