Protein–RNA interactions for Protein: Q96B54

ZNF428, Zinc finger protein 428, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF428Q96B54 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC31.33■■■□□ 2.61
ZNF428Q96B54 CREM-210ENST00000374721 2020 ntTSL 5 BASIC31.32■■■□□ 2.61
ZNF428Q96B54 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC31.32■■■□□ 2.6
ZNF428Q96B54 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
ZNF428Q96B54 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC31.32■■■□□ 2.6
ZNF428Q96B54 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC31.32■■■□□ 2.6
ZNF428Q96B54 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
ZNF428Q96B54 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC31.31■■■□□ 2.6
ZNF428Q96B54 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC31.31■■■□□ 2.6
ZNF428Q96B54 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC31.31■■■□□ 2.6
ZNF428Q96B54 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC31.31■■■□□ 2.6
ZNF428Q96B54 AC026202.3-201ENST00000600805 1127 ntBASIC31.31■■■□□ 2.6
ZNF428Q96B54 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC31.31■■■□□ 2.6
ZNF428Q96B54 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC31.3■■■□□ 2.6
ZNF428Q96B54 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC31.3■■■□□ 2.6
ZNF428Q96B54 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC31.3■■■□□ 2.6
ZNF428Q96B54 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
ZNF428Q96B54 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC31.29■■■□□ 2.6
ZNF428Q96B54 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
ZNF428Q96B54 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC31.29■■■□□ 2.6
ZNF428Q96B54 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC31.28■■■□□ 2.6
ZNF428Q96B54 RP9P-202ENST00000450133 1212 ntBASIC31.28■■■□□ 2.6
ZNF428Q96B54 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC31.28■■■□□ 2.6
ZNF428Q96B54 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
ZNF428Q96B54 AC093536.1-201ENST00000569153 554 ntBASIC31.27■■■□□ 2.6
ZNF428Q96B54 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC31.27■■■□□ 2.6
ZNF428Q96B54 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC31.26■■■□□ 2.59
ZNF428Q96B54 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC31.26■■■□□ 2.59
ZNF428Q96B54 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC31.26■■■□□ 2.59
ZNF428Q96B54 AC092803.2-201ENST00000564287 1899 ntBASIC31.26■■■□□ 2.59
ZNF428Q96B54 AC091060.1-201ENST00000623524 1766 ntBASIC31.25■■■□□ 2.59
ZNF428Q96B54 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
ZNF428Q96B54 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
ZNF428Q96B54 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC31.25■■■□□ 2.59
ZNF428Q96B54 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC31.25■■■□□ 2.59
ZNF428Q96B54 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC31.24■■■□□ 2.59
ZNF428Q96B54 SPCS2P3-201ENST00000500401 656 ntBASIC31.24■■■□□ 2.59
ZNF428Q96B54 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
ZNF428Q96B54 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC31.24■■■□□ 2.59
ZNF428Q96B54 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC31.24■■■□□ 2.59
ZNF428Q96B54 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC31.23■■■□□ 2.59
ZNF428Q96B54 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC31.23■■■□□ 2.59
ZNF428Q96B54 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC31.23■■■□□ 2.59
ZNF428Q96B54 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC31.23■■■□□ 2.59
ZNF428Q96B54 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC31.22■■■□□ 2.59
ZNF428Q96B54 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC31.22■■■□□ 2.59
ZNF428Q96B54 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC31.22■■■□□ 2.59
ZNF428Q96B54 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC31.22■■■□□ 2.59
ZNF428Q96B54 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC31.22■■■□□ 2.59
ZNF428Q96B54 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC31.22■■■□□ 2.59
ZNF428Q96B54 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC31.22■■■□□ 2.59
ZNF428Q96B54 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC31.22■■■□□ 2.59
ZNF428Q96B54 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
ZNF428Q96B54 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC31.22■■■□□ 2.59
ZNF428Q96B54 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC31.21■■■□□ 2.59
ZNF428Q96B54 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC31.21■■■□□ 2.59
ZNF428Q96B54 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC31.21■■■□□ 2.59
ZNF428Q96B54 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
ZNF428Q96B54 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC31.21■■■□□ 2.59
ZNF428Q96B54 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
ZNF428Q96B54 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC31.2■■■□□ 2.59
ZNF428Q96B54 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.59
ZNF428Q96B54 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.59
ZNF428Q96B54 RARRES2P1-201ENST00000474487 481 ntBASIC31.2■■■□□ 2.59
ZNF428Q96B54 AC145676.1-201ENST00000514988 2004 ntBASIC31.2■■■□□ 2.58
ZNF428Q96B54 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.58
ZNF428Q96B54 DUSP8P4-201ENST00000399538 1761 ntBASIC31.2■■■□□ 2.58
ZNF428Q96B54 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.58
ZNF428Q96B54 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
ZNF428Q96B54 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC31.19■■■□□ 2.58
ZNF428Q96B54 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
ZNF428Q96B54 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC31.19■■■□□ 2.58
ZNF428Q96B54 DUX4L9-201ENST00000449051 1259 ntBASIC31.18■■■□□ 2.58
ZNF428Q96B54 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC31.18■■■□□ 2.58
ZNF428Q96B54 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC31.17■■■□□ 2.58
ZNF428Q96B54 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
ZNF428Q96B54 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC31.17■■■□□ 2.58
ZNF428Q96B54 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC31.16■■■□□ 2.58
ZNF428Q96B54 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
ZNF428Q96B54 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC31.16■■■□□ 2.58
ZNF428Q96B54 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
ZNF428Q96B54 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC31.16■■■□□ 2.58
ZNF428Q96B54 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
ZNF428Q96B54 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC31.15■■■□□ 2.58
ZNF428Q96B54 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC31.15■■■□□ 2.58
ZNF428Q96B54 RAP2CP1-202ENST00000605179 643 ntBASIC31.15■■■□□ 2.58
ZNF428Q96B54 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC31.15■■■□□ 2.58
ZNF428Q96B54 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC31.13■■■□□ 2.57
ZNF428Q96B54 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC31.13■■■□□ 2.57
ZNF428Q96B54 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
ZNF428Q96B54 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
ZNF428Q96B54 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
ZNF428Q96B54 AC010501.1-201ENST00000606270 1962 ntBASIC31.12■■■□□ 2.57
ZNF428Q96B54 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC31.12■■■□□ 2.57
ZNF428Q96B54 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC31.12■■■□□ 2.57
ZNF428Q96B54 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC31.12■■■□□ 2.57
ZNF428Q96B54 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC31.12■■■□□ 2.57
ZNF428Q96B54 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC31.12■■■□□ 2.57
ZNF428Q96B54 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
ZNF428Q96B54 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
Retrieved 100 of 98,524 protein–RNA pairs in 53.6 ms