Protein–RNA interactions for Protein: Q92834

RPGR, X-linked retinitis pigmentosa GTPase regulator, humanhuman

Known RBP Predictions only

Length 1,020 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRQ92834 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC30.24■■■□□ 2.43
RPGRQ92834 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
RPGRQ92834 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC30.24■■■□□ 2.43
RPGRQ92834 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC30.23■■■□□ 2.43
RPGRQ92834 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
RPGRQ92834 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC30.23■■■□□ 2.43
RPGRQ92834 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC30.23■■■□□ 2.43
RPGRQ92834 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC30.23■■■□□ 2.43
RPGRQ92834 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC30.22■■■□□ 2.43
RPGRQ92834 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC30.22■■■□□ 2.43
RPGRQ92834 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC30.22■■■□□ 2.43
RPGRQ92834 CREM-229ENST00000474362 1030 ntTSL 2 BASIC30.22■■■□□ 2.43
RPGRQ92834 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC30.22■■■□□ 2.43
RPGRQ92834 ST7-205ENST00000393446 2114 ntTSL 5 BASIC30.22■■■□□ 2.43
RPGRQ92834 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
RPGRQ92834 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
RPGRQ92834 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC30.22■■■□□ 2.43
RPGRQ92834 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC30.22■■■□□ 2.43
RPGRQ92834 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC30.21■■■□□ 2.43
RPGRQ92834 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC30.21■■■□□ 2.43
RPGRQ92834 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC30.21■■■□□ 2.43
RPGRQ92834 GRAMD4P7-201ENST00000578182 1232 ntBASIC30.2■■■□□ 2.43
RPGRQ92834 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC30.2■■■□□ 2.43
RPGRQ92834 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC30.2■■■□□ 2.42
RPGRQ92834 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC30.2■■■□□ 2.42
RPGRQ92834 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC30.19■■■□□ 2.42
RPGRQ92834 AL449106.1-201ENST00000608517 1980 ntBASIC30.19■■■□□ 2.42
RPGRQ92834 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC30.19■■■□□ 2.42
RPGRQ92834 KRT18P10-201ENST00000388836 1287 ntBASIC30.19■■■□□ 2.42
RPGRQ92834 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC30.19■■■□□ 2.42
RPGRQ92834 KRT125P-201ENST00000546827 989 ntBASIC30.19■■■□□ 2.42
RPGRQ92834 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC30.18■■■□□ 2.42
RPGRQ92834 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC30.18■■■□□ 2.42
RPGRQ92834 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC30.18■■■□□ 2.42
RPGRQ92834 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC30.18■■■□□ 2.42
RPGRQ92834 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
RPGRQ92834 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
RPGRQ92834 AC022616.5-201ENST00000518796 181 ntBASIC30.17■■■□□ 2.42
RPGRQ92834 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC30.17■■■□□ 2.42
RPGRQ92834 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC30.17■■■□□ 2.42
RPGRQ92834 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC30.16■■■□□ 2.42
RPGRQ92834 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC30.16■■■□□ 2.42
RPGRQ92834 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC30.16■■■□□ 2.42
RPGRQ92834 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC30.16■■■□□ 2.42
RPGRQ92834 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC30.15■■■□□ 2.42
RPGRQ92834 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC30.15■■■□□ 2.42
RPGRQ92834 BX664725.1-201ENST00000438252 379 ntBASIC30.15■■■□□ 2.42
RPGRQ92834 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC30.15■■■□□ 2.42
RPGRQ92834 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC30.15■■■□□ 2.42
RPGRQ92834 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC30.15■■■□□ 2.42
RPGRQ92834 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
RPGRQ92834 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC30.14■■■□□ 2.42
RPGRQ92834 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC30.14■■■□□ 2.42
RPGRQ92834 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
RPGRQ92834 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC30.13■■■□□ 2.41
RPGRQ92834 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC30.13■■■□□ 2.41
RPGRQ92834 MIR4787-201ENST00000607364 84 ntBASIC30.13■■■□□ 2.41
RPGRQ92834 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC30.12■■■□□ 2.41
RPGRQ92834 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
RPGRQ92834 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC30.12■■■□□ 2.41
RPGRQ92834 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
RPGRQ92834 AC008406.3-201ENST00000620001 1374 ntBASIC30.12■■■□□ 2.41
RPGRQ92834 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC30.12■■■□□ 2.41
RPGRQ92834 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC30.12■■■□□ 2.41
RPGRQ92834 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
RPGRQ92834 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
RPGRQ92834 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC30.11■■■□□ 2.41
RPGRQ92834 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
RPGRQ92834 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC30.1■■■□□ 2.41
RPGRQ92834 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC30.1■■■□□ 2.41
RPGRQ92834 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
RPGRQ92834 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC30.1■■■□□ 2.41
RPGRQ92834 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC30.1■■■□□ 2.41
RPGRQ92834 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC30.1■■■□□ 2.41
RPGRQ92834 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC30.1■■■□□ 2.41
RPGRQ92834 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC30.1■■■□□ 2.41
RPGRQ92834 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC30.1■■■□□ 2.41
RPGRQ92834 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC30.1■■■□□ 2.41
RPGRQ92834 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC30.1■■■□□ 2.41
RPGRQ92834 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC30.09■■■□□ 2.41
RPGRQ92834 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC30.09■■■□□ 2.41
RPGRQ92834 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC30.09■■■□□ 2.41
RPGRQ92834 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC30.09■■■□□ 2.41
RPGRQ92834 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC30.08■■■□□ 2.41
RPGRQ92834 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC30.08■■■□□ 2.41
RPGRQ92834 DRD5P2-201ENST00000421395 2012 ntBASIC30.08■■■□□ 2.41
RPGRQ92834 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
RPGRQ92834 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC30.08■■■□□ 2.41
RPGRQ92834 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC30.08■■■□□ 2.41
RPGRQ92834 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC30.08■■■□□ 2.41
RPGRQ92834 ST7-202ENST00000323984 2142 ntTSL 5 BASIC30.07■■■□□ 2.4
RPGRQ92834 ST7-207ENST00000393449 2127 ntTSL 5 BASIC30.07■■■□□ 2.4
RPGRQ92834 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC30.06■■■□□ 2.4
RPGRQ92834 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
RPGRQ92834 KRT18P24-201ENST00000344739 1156 ntBASIC30.06■■■□□ 2.4
RPGRQ92834 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC30.06■■■□□ 2.4
RPGRQ92834 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
RPGRQ92834 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC30.06■■■□□ 2.4
RPGRQ92834 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
RPGRQ92834 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms