Protein–RNA interactions for Protein: Q92538

GBF1, Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1, humanhuman

Predictions only

Length 1,859 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GBF1Q92538 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC26.41■■□□□ 1.82
GBF1Q92538 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
GBF1Q92538 WHAMMP3-201ENST00000611636 1609 ntBASIC26.4■■□□□ 1.82
GBF1Q92538 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC26.4■■□□□ 1.82
GBF1Q92538 ABCB10P3-201ENST00000561950 2166 ntBASIC26.4■■□□□ 1.82
GBF1Q92538 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC26.4■■□□□ 1.82
GBF1Q92538 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC26.4■■□□□ 1.82
GBF1Q92538 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
GBF1Q92538 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
GBF1Q92538 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC26.38■■□□□ 1.81
GBF1Q92538 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC26.38■■□□□ 1.81
GBF1Q92538 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
GBF1Q92538 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
GBF1Q92538 SRR-208ENST00000576848 588 ntTSL 4 BASIC26.38■■□□□ 1.81
GBF1Q92538 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC26.38■■□□□ 1.81
GBF1Q92538 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
GBF1Q92538 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC26.37■■□□□ 1.81
GBF1Q92538 AC022616.5-201ENST00000518796 181 ntBASIC26.37■■□□□ 1.81
GBF1Q92538 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
GBF1Q92538 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC26.37■■□□□ 1.81
GBF1Q92538 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
GBF1Q92538 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC26.36■■□□□ 1.81
GBF1Q92538 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC26.36■■□□□ 1.81
GBF1Q92538 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC26.36■■□□□ 1.81
GBF1Q92538 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC26.36■■□□□ 1.81
GBF1Q92538 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC26.36■■□□□ 1.81
GBF1Q92538 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
GBF1Q92538 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
GBF1Q92538 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
GBF1Q92538 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
GBF1Q92538 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC26.36■■□□□ 1.81
GBF1Q92538 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC26.35■■□□□ 1.81
GBF1Q92538 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC26.35■■□□□ 1.81
GBF1Q92538 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC26.35■■□□□ 1.81
GBF1Q92538 AL139246.5-201ENST00000606645 996 ntBASIC26.35■■□□□ 1.81
GBF1Q92538 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
GBF1Q92538 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC26.34■■□□□ 1.81
GBF1Q92538 NALT1-201ENST00000429224 738 ntTSL 5 BASIC26.34■■□□□ 1.81
GBF1Q92538 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC26.34■■□□□ 1.81
GBF1Q92538 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
GBF1Q92538 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC26.33■■□□□ 1.81
GBF1Q92538 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
GBF1Q92538 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC26.33■■□□□ 1.81
GBF1Q92538 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
GBF1Q92538 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
GBF1Q92538 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
GBF1Q92538 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
GBF1Q92538 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC26.32■■□□□ 1.8
GBF1Q92538 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC26.32■■□□□ 1.8
GBF1Q92538 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC26.32■■□□□ 1.8
GBF1Q92538 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC26.32■■□□□ 1.8
GBF1Q92538 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC26.32■■□□□ 1.8
GBF1Q92538 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC26.31■■□□□ 1.8
GBF1Q92538 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC26.31■■□□□ 1.8
GBF1Q92538 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
GBF1Q92538 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
GBF1Q92538 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC26.3■■□□□ 1.8
GBF1Q92538 RARRES2P6-201ENST00000567333 442 ntBASIC26.3■■□□□ 1.8
GBF1Q92538 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC26.3■■□□□ 1.8
GBF1Q92538 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC26.3■■□□□ 1.8
GBF1Q92538 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
GBF1Q92538 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
GBF1Q92538 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
GBF1Q92538 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC26.3■■□□□ 1.8
GBF1Q92538 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
GBF1Q92538 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC26.3■■□□□ 1.8
GBF1Q92538 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
GBF1Q92538 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
GBF1Q92538 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC26.29■■□□□ 1.8
GBF1Q92538 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC26.29■■□□□ 1.8
GBF1Q92538 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC26.29■■□□□ 1.8
GBF1Q92538 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC26.28■■□□□ 1.8
GBF1Q92538 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
GBF1Q92538 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC26.28■■□□□ 1.8
GBF1Q92538 AL136116.3-201ENST00000402907 1138 ntBASIC26.28■■□□□ 1.8
GBF1Q92538 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC26.28■■□□□ 1.8
GBF1Q92538 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC26.28■■□□□ 1.8
GBF1Q92538 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
GBF1Q92538 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC26.28■■□□□ 1.8
GBF1Q92538 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC26.28■■□□□ 1.8
GBF1Q92538 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
GBF1Q92538 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC26.28■■□□□ 1.8
GBF1Q92538 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC26.28■■□□□ 1.8
GBF1Q92538 AC137630.3-201ENST00000607245 391 ntBASIC26.28■■□□□ 1.8
GBF1Q92538 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC26.27■■□□□ 1.8
GBF1Q92538 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
GBF1Q92538 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC26.26■■□□□ 1.79
GBF1Q92538 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
GBF1Q92538 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC26.26■■□□□ 1.79
GBF1Q92538 TSPY9P-201ENST00000440215 945 ntBASIC26.25■■□□□ 1.79
GBF1Q92538 TSPY11P-201ENST00000442607 1045 ntBASIC26.25■■□□□ 1.79
GBF1Q92538 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC26.25■■□□□ 1.79
GBF1Q92538 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC26.25■■□□□ 1.79
GBF1Q92538 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC26.25■■□□□ 1.79
GBF1Q92538 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
GBF1Q92538 MIR4281-201ENST00000580852 62 ntBASIC26.25■■□□□ 1.79
GBF1Q92538 AL117332.1-201ENST00000622628 974 ntBASIC26.25■■□□□ 1.79
GBF1Q92538 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
GBF1Q92538 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC26.24■■□□□ 1.79
GBF1Q92538 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC26.24■■□□□ 1.79
Retrieved 100 of 98,524 protein–RNA pairs in 52.2 ms