Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC24.82■■□□□ 1.56
SHROOM3Q8TF72 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC24.82■■□□□ 1.56
SHROOM3Q8TF72 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
SHROOM3Q8TF72 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC24.82■■□□□ 1.56
SHROOM3Q8TF72 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
SHROOM3Q8TF72 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC24.82■■□□□ 1.56
SHROOM3Q8TF72 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
SHROOM3Q8TF72 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC24.81■■□□□ 1.56
SHROOM3Q8TF72 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC24.81■■□□□ 1.56
SHROOM3Q8TF72 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
SHROOM3Q8TF72 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
SHROOM3Q8TF72 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC24.8■■□□□ 1.56
SHROOM3Q8TF72 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
SHROOM3Q8TF72 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
SHROOM3Q8TF72 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
SHROOM3Q8TF72 AC010501.1-201ENST00000606270 1962 ntBASIC24.8■■□□□ 1.56
SHROOM3Q8TF72 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC24.8■■□□□ 1.56
SHROOM3Q8TF72 AC096887.2-201ENST00000623443 1957 ntBASIC24.79■■□□□ 1.56
SHROOM3Q8TF72 AC007029.1-201ENST00000604183 313 ntBASIC24.79■■□□□ 1.56
SHROOM3Q8TF72 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
SHROOM3Q8TF72 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC24.79■■□□□ 1.56
SHROOM3Q8TF72 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC24.79■■□□□ 1.56
SHROOM3Q8TF72 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
SHROOM3Q8TF72 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC24.78■■□□□ 1.56
SHROOM3Q8TF72 ECEL1P2-201ENST00000461596 1295 ntBASIC24.78■■□□□ 1.56
SHROOM3Q8TF72 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC24.78■■□□□ 1.56
SHROOM3Q8TF72 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
SHROOM3Q8TF72 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC24.77■■□□□ 1.56
SHROOM3Q8TF72 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC24.77■■□□□ 1.56
SHROOM3Q8TF72 RAP2CP1-202ENST00000605179 643 ntBASIC24.77■■□□□ 1.56
SHROOM3Q8TF72 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC24.77■■□□□ 1.56
SHROOM3Q8TF72 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
SHROOM3Q8TF72 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
SHROOM3Q8TF72 DUSP8P4-201ENST00000399538 1761 ntBASIC24.77■■□□□ 1.56
SHROOM3Q8TF72 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
SHROOM3Q8TF72 MIR3960-201ENST00000583311 91 ntBASIC24.76■■□□□ 1.55
SHROOM3Q8TF72 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC24.76■■□□□ 1.55
SHROOM3Q8TF72 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC24.76■■□□□ 1.55
SHROOM3Q8TF72 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC24.75■■□□□ 1.55
SHROOM3Q8TF72 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
SHROOM3Q8TF72 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
SHROOM3Q8TF72 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
SHROOM3Q8TF72 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC24.75■■□□□ 1.55
SHROOM3Q8TF72 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC24.75■■□□□ 1.55
SHROOM3Q8TF72 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC24.74■■□□□ 1.55
SHROOM3Q8TF72 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
SHROOM3Q8TF72 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC24.74■■□□□ 1.55
SHROOM3Q8TF72 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC24.74■■□□□ 1.55
SHROOM3Q8TF72 HYI-213ENST00000583037 1322 ntTSL 5 BASIC24.74■■□□□ 1.55
SHROOM3Q8TF72 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
SHROOM3Q8TF72 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
SHROOM3Q8TF72 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
SHROOM3Q8TF72 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC24.73■■□□□ 1.55
SHROOM3Q8TF72 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
SHROOM3Q8TF72 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
SHROOM3Q8TF72 HES4-204ENST00000484667 667 ntTSL 3 BASIC24.73■■□□□ 1.55
SHROOM3Q8TF72 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
SHROOM3Q8TF72 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC24.72■■□□□ 1.55
SHROOM3Q8TF72 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC24.72■■□□□ 1.55
SHROOM3Q8TF72 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
SHROOM3Q8TF72 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
SHROOM3Q8TF72 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
SHROOM3Q8TF72 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
SHROOM3Q8TF72 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
SHROOM3Q8TF72 RNF126P1-201ENST00000567452 1320 ntBASIC24.71■■□□□ 1.55
SHROOM3Q8TF72 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC24.7■■□□□ 1.54
SHROOM3Q8TF72 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
SHROOM3Q8TF72 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
SHROOM3Q8TF72 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC24.7■■□□□ 1.54
SHROOM3Q8TF72 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
SHROOM3Q8TF72 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC24.7■■□□□ 1.54
SHROOM3Q8TF72 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
SHROOM3Q8TF72 AC145676.1-201ENST00000514988 2004 ntBASIC24.69■■□□□ 1.54
SHROOM3Q8TF72 AL033527.3-201ENST00000566366 1196 ntBASIC24.69■■□□□ 1.54
SHROOM3Q8TF72 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
SHROOM3Q8TF72 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC24.69■■□□□ 1.54
SHROOM3Q8TF72 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC24.69■■□□□ 1.54
SHROOM3Q8TF72 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC24.69■■□□□ 1.54
SHROOM3Q8TF72 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC24.69■■□□□ 1.54
SHROOM3Q8TF72 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
SHROOM3Q8TF72 AC019069.1-201ENST00000610008 1333 ntBASIC24.68■■□□□ 1.54
SHROOM3Q8TF72 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC24.68■■□□□ 1.54
SHROOM3Q8TF72 AC026202.3-201ENST00000600805 1127 ntBASIC24.68■■□□□ 1.54
SHROOM3Q8TF72 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
SHROOM3Q8TF72 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC24.68■■□□□ 1.54
SHROOM3Q8TF72 RP9P-202ENST00000450133 1212 ntBASIC24.67■■□□□ 1.54
SHROOM3Q8TF72 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC24.67■■□□□ 1.54
SHROOM3Q8TF72 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
SHROOM3Q8TF72 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC24.67■■□□□ 1.54
SHROOM3Q8TF72 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
SHROOM3Q8TF72 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC24.66■■□□□ 1.54
SHROOM3Q8TF72 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC24.66■■□□□ 1.54
SHROOM3Q8TF72 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC24.66■■□□□ 1.54
SHROOM3Q8TF72 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
SHROOM3Q8TF72 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
SHROOM3Q8TF72 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC24.65■■□□□ 1.54
SHROOM3Q8TF72 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
SHROOM3Q8TF72 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC24.65■■□□□ 1.54
SHROOM3Q8TF72 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
SHROOM3Q8TF72 AC133552.2-201ENST00000619106 1032 ntBASIC24.65■■□□□ 1.54
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms