Protein–RNA interactions for Protein: Q8R550

Sh3kbp1, SH3 domain-containing kinase-binding protein 1, mousemouse

Known RBP Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3kbp1Q8R550 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Sh3kbp1Q8R550 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Sh3kbp1Q8R550 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Sh3kbp1Q8R550 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Sh3kbp1Q8R550 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC22.5■■□□□ 1.19
Sh3kbp1Q8R550 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
Sh3kbp1Q8R550 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Sh3kbp1Q8R550 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Sh3kbp1Q8R550 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC22.5■■□□□ 1.19
Sh3kbp1Q8R550 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC22.5■■□□□ 1.19
Sh3kbp1Q8R550 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Sh3kbp1Q8R550 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC22.5■■□□□ 1.19
Sh3kbp1Q8R550 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Sh3kbp1Q8R550 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC22.49■■□□□ 1.19
Sh3kbp1Q8R550 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Sh3kbp1Q8R550 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC22.49■■□□□ 1.19
Sh3kbp1Q8R550 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Sh3kbp1Q8R550 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Sh3kbp1Q8R550 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC22.48■■□□□ 1.19
Sh3kbp1Q8R550 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC22.48■■□□□ 1.19
Sh3kbp1Q8R550 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
Sh3kbp1Q8R550 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
Sh3kbp1Q8R550 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
Sh3kbp1Q8R550 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
Sh3kbp1Q8R550 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
Sh3kbp1Q8R550 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Sh3kbp1Q8R550 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC22.47■■□□□ 1.19
Sh3kbp1Q8R550 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Sh3kbp1Q8R550 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC22.47■■□□□ 1.19
Sh3kbp1Q8R550 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC22.47■■□□□ 1.19
Sh3kbp1Q8R550 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Sh3kbp1Q8R550 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC22.47■■□□□ 1.19
Sh3kbp1Q8R550 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Sh3kbp1Q8R550 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC22.47■■□□□ 1.19
Sh3kbp1Q8R550 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC22.47■■□□□ 1.19
Sh3kbp1Q8R550 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Sh3kbp1Q8R550 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Sh3kbp1Q8R550 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Sh3kbp1Q8R550 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC22.46■■□□□ 1.19
Sh3kbp1Q8R550 Gm43592-201ENSMUST00000196922 1165 ntBASIC22.46■■□□□ 1.19
Sh3kbp1Q8R550 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC22.46■■□□□ 1.19
Sh3kbp1Q8R550 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
Sh3kbp1Q8R550 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC22.46■■□□□ 1.19
Sh3kbp1Q8R550 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC22.46■■□□□ 1.19
Sh3kbp1Q8R550 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Sh3kbp1Q8R550 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC22.46■■□□□ 1.19
Sh3kbp1Q8R550 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC22.45■■□□□ 1.19
Sh3kbp1Q8R550 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC22.45■■□□□ 1.18
Sh3kbp1Q8R550 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC22.45■■□□□ 1.18
Sh3kbp1Q8R550 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC22.45■■□□□ 1.18
Sh3kbp1Q8R550 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
Sh3kbp1Q8R550 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC22.44■■□□□ 1.18
Sh3kbp1Q8R550 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC22.44■■□□□ 1.18
Sh3kbp1Q8R550 Gm15546-201ENSMUST00000122095 826 ntBASIC22.44■■□□□ 1.18
Sh3kbp1Q8R550 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Sh3kbp1Q8R550 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Sh3kbp1Q8R550 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Sh3kbp1Q8R550 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Sh3kbp1Q8R550 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC22.43■■□□□ 1.18
Sh3kbp1Q8R550 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Sh3kbp1Q8R550 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Sh3kbp1Q8R550 AC117769.4-201ENSMUST00000225679 685 ntBASIC22.43■■□□□ 1.18
Sh3kbp1Q8R550 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Sh3kbp1Q8R550 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC22.42■■□□□ 1.18
Sh3kbp1Q8R550 Gm13238-201ENSMUST00000117655 780 ntBASIC22.42■■□□□ 1.18
Sh3kbp1Q8R550 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC22.42■■□□□ 1.18
Sh3kbp1Q8R550 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
Sh3kbp1Q8R550 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC22.41■■□□□ 1.18
Sh3kbp1Q8R550 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC22.41■■□□□ 1.18
Sh3kbp1Q8R550 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC22.41■■□□□ 1.18
Sh3kbp1Q8R550 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC22.41■■□□□ 1.18
Sh3kbp1Q8R550 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC22.4■■□□□ 1.18
Sh3kbp1Q8R550 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Sh3kbp1Q8R550 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Sh3kbp1Q8R550 Gm5522-201ENSMUST00000189483 1242 ntBASIC22.4■■□□□ 1.18
Sh3kbp1Q8R550 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
Sh3kbp1Q8R550 Gm7199-201ENSMUST00000118327 1485 ntBASIC22.4■■□□□ 1.18
Sh3kbp1Q8R550 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC22.39■■□□□ 1.18
Sh3kbp1Q8R550 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC22.39■■□□□ 1.18
Sh3kbp1Q8R550 H3f3aos-201ENSMUST00000097448 2905 ntBASIC22.39■■□□□ 1.18
Sh3kbp1Q8R550 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC22.39■■□□□ 1.18
Sh3kbp1Q8R550 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
Sh3kbp1Q8R550 Gm22567-201ENSMUST00000175542 342 ntBASIC22.39■■□□□ 1.17
Sh3kbp1Q8R550 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Sh3kbp1Q8R550 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Sh3kbp1Q8R550 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Sh3kbp1Q8R550 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Sh3kbp1Q8R550 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Sh3kbp1Q8R550 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC22.38■■□□□ 1.17
Sh3kbp1Q8R550 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC22.38■■□□□ 1.17
Sh3kbp1Q8R550 Nsd1-203ENSMUST00000224156 1149 ntBASIC22.38■■□□□ 1.17
Sh3kbp1Q8R550 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Sh3kbp1Q8R550 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC22.38■■□□□ 1.17
Sh3kbp1Q8R550 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC22.37■■□□□ 1.17
Sh3kbp1Q8R550 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Sh3kbp1Q8R550 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
Sh3kbp1Q8R550 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
Sh3kbp1Q8R550 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
Sh3kbp1Q8R550 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC22.36■■□□□ 1.17
Sh3kbp1Q8R550 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC22.35■■□□□ 1.17
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms