Protein–RNA interactions for Protein: Q8N9H8

EXD3, Exonuclease mut-7 homolog, humanhuman

Predictions only

Length 876 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXD3Q8N9H8 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC22.89■■□□□ 1.25
EXD3Q8N9H8 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
EXD3Q8N9H8 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC22.89■■□□□ 1.25
EXD3Q8N9H8 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC22.88■■□□□ 1.25
EXD3Q8N9H8 IDNK-203ENST00000405990 629 ntTSL 2 BASIC22.88■■□□□ 1.25
EXD3Q8N9H8 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
EXD3Q8N9H8 RNF146-205ENST00000477776 762 ntTSL 3 BASIC22.88■■□□□ 1.25
EXD3Q8N9H8 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC22.88■■□□□ 1.25
EXD3Q8N9H8 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC22.88■■□□□ 1.25
EXD3Q8N9H8 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
EXD3Q8N9H8 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
EXD3Q8N9H8 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC22.87■■□□□ 1.25
EXD3Q8N9H8 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC22.87■■□□□ 1.25
EXD3Q8N9H8 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
EXD3Q8N9H8 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
EXD3Q8N9H8 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
EXD3Q8N9H8 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
EXD3Q8N9H8 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
EXD3Q8N9H8 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
EXD3Q8N9H8 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC22.85■■□□□ 1.25
EXD3Q8N9H8 AL121749.1-202ENST00000609313 2153 ntBASIC22.85■■□□□ 1.25
EXD3Q8N9H8 MTX2-204ENST00000443241 799 ntTSL 3 BASIC22.85■■□□□ 1.25
EXD3Q8N9H8 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC22.85■■□□□ 1.25
EXD3Q8N9H8 BX255925.1-201ENST00000566954 1854 ntBASIC22.85■■□□□ 1.25
EXD3Q8N9H8 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
EXD3Q8N9H8 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC22.84■■□□□ 1.25
EXD3Q8N9H8 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
EXD3Q8N9H8 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
EXD3Q8N9H8 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC22.84■■□□□ 1.25
EXD3Q8N9H8 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC22.83■■□□□ 1.25
EXD3Q8N9H8 AC100797.4-201ENST00000631653 1827 ntBASIC22.83■■□□□ 1.25
EXD3Q8N9H8 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
EXD3Q8N9H8 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
EXD3Q8N9H8 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC22.83■■□□□ 1.24
EXD3Q8N9H8 PEMT-206ENST00000435340 960 ntTSL 5 BASIC22.82■■□□□ 1.24
EXD3Q8N9H8 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC22.82■■□□□ 1.24
EXD3Q8N9H8 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC22.82■■□□□ 1.24
EXD3Q8N9H8 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
EXD3Q8N9H8 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC22.81■■□□□ 1.24
EXD3Q8N9H8 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC22.81■■□□□ 1.24
EXD3Q8N9H8 GRAMD4P7-201ENST00000578182 1232 ntBASIC22.81■■□□□ 1.24
EXD3Q8N9H8 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
EXD3Q8N9H8 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC22.8■■□□□ 1.24
EXD3Q8N9H8 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC22.8■■□□□ 1.24
EXD3Q8N9H8 CREM-229ENST00000474362 1030 ntTSL 2 BASIC22.8■■□□□ 1.24
EXD3Q8N9H8 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
EXD3Q8N9H8 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC22.8■■□□□ 1.24
EXD3Q8N9H8 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC22.8■■□□□ 1.24
EXD3Q8N9H8 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
EXD3Q8N9H8 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC22.79■■□□□ 1.24
EXD3Q8N9H8 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
EXD3Q8N9H8 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
EXD3Q8N9H8 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC22.79■■□□□ 1.24
EXD3Q8N9H8 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC22.78■■□□□ 1.24
EXD3Q8N9H8 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC22.78■■□□□ 1.24
EXD3Q8N9H8 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
EXD3Q8N9H8 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC22.78■■□□□ 1.24
EXD3Q8N9H8 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
EXD3Q8N9H8 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
EXD3Q8N9H8 Z92544.1-202ENST00000571933 1220 ntBASIC22.77■■□□□ 1.24
EXD3Q8N9H8 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC22.77■■□□□ 1.24
EXD3Q8N9H8 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
EXD3Q8N9H8 SHF-208ENST00000560734 1731 ntTSL 3 BASIC22.77■■□□□ 1.23
EXD3Q8N9H8 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
EXD3Q8N9H8 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
EXD3Q8N9H8 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC22.76■■□□□ 1.23
EXD3Q8N9H8 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC22.76■■□□□ 1.23
EXD3Q8N9H8 LINC01003-201ENST00000564834 1764 ntBASIC22.76■■□□□ 1.23
EXD3Q8N9H8 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC22.76■■□□□ 1.23
EXD3Q8N9H8 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
EXD3Q8N9H8 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC22.75■■□□□ 1.23
EXD3Q8N9H8 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
EXD3Q8N9H8 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
EXD3Q8N9H8 MIR638-201ENST00000385237 100 ntBASIC22.75■■□□□ 1.23
EXD3Q8N9H8 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC22.75■■□□□ 1.23
EXD3Q8N9H8 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC22.75■■□□□ 1.23
EXD3Q8N9H8 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
EXD3Q8N9H8 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC22.74■■□□□ 1.23
EXD3Q8N9H8 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC22.74■■□□□ 1.23
EXD3Q8N9H8 TK2-216ENST00000564917 1156 ntTSL 3 BASIC22.74■■□□□ 1.23
EXD3Q8N9H8 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC22.74■■□□□ 1.23
EXD3Q8N9H8 AC019171.1-201ENST00000601251 1056 ntBASIC22.74■■□□□ 1.23
EXD3Q8N9H8 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC22.74■■□□□ 1.23
EXD3Q8N9H8 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
EXD3Q8N9H8 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
EXD3Q8N9H8 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC22.73■■□□□ 1.23
EXD3Q8N9H8 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC22.73■■□□□ 1.23
EXD3Q8N9H8 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC22.73■■□□□ 1.23
EXD3Q8N9H8 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
EXD3Q8N9H8 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC22.72■■□□□ 1.23
EXD3Q8N9H8 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC22.72■■□□□ 1.23
EXD3Q8N9H8 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC22.72■■□□□ 1.23
EXD3Q8N9H8 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC22.72■■□□□ 1.23
EXD3Q8N9H8 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC22.72■■□□□ 1.23
EXD3Q8N9H8 AP002414.2-202ENST00000590929 1450 ntBASIC22.72■■□□□ 1.23
EXD3Q8N9H8 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC22.71■■□□□ 1.23
EXD3Q8N9H8 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC22.71■■□□□ 1.23
EXD3Q8N9H8 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
EXD3Q8N9H8 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.23
EXD3Q8N9H8 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC22.7■■□□□ 1.23
Retrieved 100 of 98,524 protein–RNA pairs in 253.1 ms