Protein–RNA interactions for Protein: Q8K4L0

Ddx54, ATP-dependent RNA helicase DDX54, mousemouse

Known RBP Predictions only

Length 874 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx54Q8K4L0 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC29.5■■■□□ 2.31
Ddx54Q8K4L0 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC29.5■■■□□ 2.31
Ddx54Q8K4L0 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC29.5■■■□□ 2.31
Ddx54Q8K4L0 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC29.49■■■□□ 2.31
Ddx54Q8K4L0 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC29.49■■■□□ 2.31
Ddx54Q8K4L0 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC29.49■■■□□ 2.31
Ddx54Q8K4L0 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC29.48■■■□□ 2.31
Ddx54Q8K4L0 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC29.48■■■□□ 2.31
Ddx54Q8K4L0 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC29.48■■■□□ 2.31
Ddx54Q8K4L0 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC29.48■■■□□ 2.31
Ddx54Q8K4L0 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC29.47■■■□□ 2.31
Ddx54Q8K4L0 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC29.47■■■□□ 2.31
Ddx54Q8K4L0 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC29.47■■■□□ 2.31
Ddx54Q8K4L0 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC29.46■■■□□ 2.31
Ddx54Q8K4L0 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC29.46■■■□□ 2.31
Ddx54Q8K4L0 Flvcr1-202ENSMUST00000191946 1216 ntBASIC29.46■■■□□ 2.31
Ddx54Q8K4L0 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC29.45■■■□□ 2.31
Ddx54Q8K4L0 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.31
Ddx54Q8K4L0 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC29.44■■■□□ 2.3
Ddx54Q8K4L0 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC29.44■■■□□ 2.3
Ddx54Q8K4L0 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
Ddx54Q8K4L0 AC164433.2-201ENSMUST00000226346 1701 ntBASIC29.43■■■□□ 2.3
Ddx54Q8K4L0 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
Ddx54Q8K4L0 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
Ddx54Q8K4L0 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC29.43■■■□□ 2.3
Ddx54Q8K4L0 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC29.43■■■□□ 2.3
Ddx54Q8K4L0 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
Ddx54Q8K4L0 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC29.42■■■□□ 2.3
Ddx54Q8K4L0 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC29.42■■■□□ 2.3
Ddx54Q8K4L0 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC29.42■■■□□ 2.3
Ddx54Q8K4L0 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC29.42■■■□□ 2.3
Ddx54Q8K4L0 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC29.41■■■□□ 2.3
Ddx54Q8K4L0 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
Ddx54Q8K4L0 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC29.41■■■□□ 2.3
Ddx54Q8K4L0 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC29.4■■■□□ 2.3
Ddx54Q8K4L0 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC29.4■■■□□ 2.3
Ddx54Q8K4L0 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC29.4■■■□□ 2.3
Ddx54Q8K4L0 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.3
Ddx54Q8K4L0 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.3
Ddx54Q8K4L0 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.3
Ddx54Q8K4L0 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC29.39■■■□□ 2.3
Ddx54Q8K4L0 Gm28536-201ENSMUST00000190971 1317 ntBASIC29.39■■■□□ 2.3
Ddx54Q8K4L0 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC29.38■■■□□ 2.29
Ddx54Q8K4L0 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC29.37■■■□□ 2.29
Ddx54Q8K4L0 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC29.37■■■□□ 2.29
Ddx54Q8K4L0 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC29.37■■■□□ 2.29
Ddx54Q8K4L0 Gm7199-201ENSMUST00000118327 1485 ntBASIC29.36■■■□□ 2.29
Ddx54Q8K4L0 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
Ddx54Q8K4L0 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
Ddx54Q8K4L0 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC29.36■■■□□ 2.29
Ddx54Q8K4L0 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC29.36■■■□□ 2.29
Ddx54Q8K4L0 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC29.36■■■□□ 2.29
Ddx54Q8K4L0 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC29.36■■■□□ 2.29
Ddx54Q8K4L0 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC29.36■■■□□ 2.29
Ddx54Q8K4L0 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
Ddx54Q8K4L0 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC29.35■■■□□ 2.29
Ddx54Q8K4L0 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC29.34■■■□□ 2.29
Ddx54Q8K4L0 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC29.34■■■□□ 2.29
Ddx54Q8K4L0 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC29.33■■■□□ 2.29
Ddx54Q8K4L0 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC29.31■■■□□ 2.28
Ddx54Q8K4L0 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC29.31■■■□□ 2.28
Ddx54Q8K4L0 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC29.31■■■□□ 2.28
Ddx54Q8K4L0 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC29.31■■■□□ 2.28
Ddx54Q8K4L0 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC29.3■■■□□ 2.28
Ddx54Q8K4L0 Gm8495-201ENSMUST00000188740 694 ntBASIC29.3■■■□□ 2.28
Ddx54Q8K4L0 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
Ddx54Q8K4L0 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
Ddx54Q8K4L0 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
Ddx54Q8K4L0 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
Ddx54Q8K4L0 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC29.29■■■□□ 2.28
Ddx54Q8K4L0 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC29.29■■■□□ 2.28
Ddx54Q8K4L0 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC29.28■■■□□ 2.28
Ddx54Q8K4L0 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC29.28■■■□□ 2.28
Ddx54Q8K4L0 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC29.28■■■□□ 2.28
Ddx54Q8K4L0 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC29.28■■■□□ 2.28
Ddx54Q8K4L0 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC29.27■■■□□ 2.28
Ddx54Q8K4L0 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.27
Ddx54Q8K4L0 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC29.26■■■□□ 2.27
Ddx54Q8K4L0 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC29.26■■■□□ 2.27
Ddx54Q8K4L0 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC29.26■■■□□ 2.27
Ddx54Q8K4L0 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC29.26■■■□□ 2.27
Ddx54Q8K4L0 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC29.26■■■□□ 2.27
Ddx54Q8K4L0 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC29.25■■■□□ 2.27
Ddx54Q8K4L0 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC29.25■■■□□ 2.27
Ddx54Q8K4L0 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC29.24■■■□□ 2.27
Ddx54Q8K4L0 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC29.24■■■□□ 2.27
Ddx54Q8K4L0 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC29.24■■■□□ 2.27
Ddx54Q8K4L0 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC29.24■■■□□ 2.27
Ddx54Q8K4L0 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC29.24■■■□□ 2.27
Ddx54Q8K4L0 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC29.24■■■□□ 2.27
Ddx54Q8K4L0 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC29.24■■■□□ 2.27
Ddx54Q8K4L0 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC29.23■■■□□ 2.27
Ddx54Q8K4L0 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC29.23■■■□□ 2.27
Ddx54Q8K4L0 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC29.22■■■□□ 2.27
Ddx54Q8K4L0 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC29.22■■■□□ 2.27
Ddx54Q8K4L0 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC29.22■■■□□ 2.27
Ddx54Q8K4L0 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC29.21■■■□□ 2.27
Ddx54Q8K4L0 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC29.21■■■□□ 2.27
Ddx54Q8K4L0 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC29.21■■■□□ 2.27
Ddx54Q8K4L0 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC29.21■■■□□ 2.27
Retrieved 100 of 76,532 protein–RNA pairs in 152.4 ms