Protein–RNA interactions for Protein: Q8IZC6

COL27A1, Collagen alpha-1(XXVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,860 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1Q8IZC6 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC23.3■■□□□ 1.32
COL27A1Q8IZC6 CREM-229ENST00000474362 1030 ntTSL 2 BASIC23.3■■□□□ 1.32
COL27A1Q8IZC6 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC23.3■■□□□ 1.32
COL27A1Q8IZC6 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC23.3■■□□□ 1.32
COL27A1Q8IZC6 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC23.29■■□□□ 1.32
COL27A1Q8IZC6 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
COL27A1Q8IZC6 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
COL27A1Q8IZC6 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
COL27A1Q8IZC6 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC23.28■■□□□ 1.32
COL27A1Q8IZC6 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC23.28■■□□□ 1.32
COL27A1Q8IZC6 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
COL27A1Q8IZC6 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
COL27A1Q8IZC6 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
COL27A1Q8IZC6 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC23.27■■□□□ 1.32
COL27A1Q8IZC6 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
COL27A1Q8IZC6 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC23.26■■□□□ 1.31
COL27A1Q8IZC6 AC239859.2-201ENST00000444165 318 ntBASIC23.26■■□□□ 1.31
COL27A1Q8IZC6 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC23.26■■□□□ 1.31
COL27A1Q8IZC6 LSM7-203ENST00000585409 512 ntTSL 2 BASIC23.26■■□□□ 1.31
COL27A1Q8IZC6 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC23.26■■□□□ 1.31
COL27A1Q8IZC6 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC23.26■■□□□ 1.31
COL27A1Q8IZC6 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
COL27A1Q8IZC6 GRAMD4P7-201ENST00000578182 1232 ntBASIC23.26■■□□□ 1.31
COL27A1Q8IZC6 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC23.26■■□□□ 1.31
COL27A1Q8IZC6 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
COL27A1Q8IZC6 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
COL27A1Q8IZC6 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC23.25■■□□□ 1.31
COL27A1Q8IZC6 LONRF2P2-201ENST00000439212 571 ntBASIC23.25■■□□□ 1.31
COL27A1Q8IZC6 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC23.25■■□□□ 1.31
COL27A1Q8IZC6 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
COL27A1Q8IZC6 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC23.25■■□□□ 1.31
COL27A1Q8IZC6 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC23.24■■□□□ 1.31
COL27A1Q8IZC6 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
COL27A1Q8IZC6 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC23.24■■□□□ 1.31
COL27A1Q8IZC6 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC23.24■■□□□ 1.31
COL27A1Q8IZC6 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC23.24■■□□□ 1.31
COL27A1Q8IZC6 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
COL27A1Q8IZC6 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
COL27A1Q8IZC6 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
COL27A1Q8IZC6 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
COL27A1Q8IZC6 UNC93B8-201ENST00000511903 705 ntBASIC23.22■■□□□ 1.31
COL27A1Q8IZC6 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC23.22■■□□□ 1.31
COL27A1Q8IZC6 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC23.22■■□□□ 1.31
COL27A1Q8IZC6 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
COL27A1Q8IZC6 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
COL27A1Q8IZC6 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC23.22■■□□□ 1.31
COL27A1Q8IZC6 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
COL27A1Q8IZC6 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC23.22■■□□□ 1.31
COL27A1Q8IZC6 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC23.22■■□□□ 1.31
COL27A1Q8IZC6 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC23.21■■□□□ 1.31
COL27A1Q8IZC6 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC23.21■■□□□ 1.31
COL27A1Q8IZC6 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC23.21■■□□□ 1.31
COL27A1Q8IZC6 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC23.21■■□□□ 1.31
COL27A1Q8IZC6 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC23.21■■□□□ 1.31
COL27A1Q8IZC6 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC23.21■■□□□ 1.31
COL27A1Q8IZC6 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC23.21■■□□□ 1.31
COL27A1Q8IZC6 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC23.21■■□□□ 1.31
COL27A1Q8IZC6 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.31
COL27A1Q8IZC6 ST7-205ENST00000393446 2114 ntTSL 5 BASIC23.2■■□□□ 1.3
COL27A1Q8IZC6 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
COL27A1Q8IZC6 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
COL27A1Q8IZC6 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
COL27A1Q8IZC6 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
COL27A1Q8IZC6 AC022616.5-201ENST00000518796 181 ntBASIC23.19■■□□□ 1.3
COL27A1Q8IZC6 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
COL27A1Q8IZC6 LINC01003-201ENST00000564834 1764 ntBASIC23.19■■□□□ 1.3
COL27A1Q8IZC6 ST7-202ENST00000323984 2142 ntTSL 5 BASIC23.19■■□□□ 1.3
COL27A1Q8IZC6 ST7-207ENST00000393449 2127 ntTSL 5 BASIC23.19■■□□□ 1.3
COL27A1Q8IZC6 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
COL27A1Q8IZC6 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
COL27A1Q8IZC6 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC23.19■■□□□ 1.3
COL27A1Q8IZC6 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC23.19■■□□□ 1.3
COL27A1Q8IZC6 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
COL27A1Q8IZC6 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
COL27A1Q8IZC6 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
COL27A1Q8IZC6 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
COL27A1Q8IZC6 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC23.18■■□□□ 1.3
COL27A1Q8IZC6 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC23.18■■□□□ 1.3
COL27A1Q8IZC6 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
COL27A1Q8IZC6 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC23.17■■□□□ 1.3
COL27A1Q8IZC6 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC23.17■■□□□ 1.3
COL27A1Q8IZC6 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC23.17■■□□□ 1.3
COL27A1Q8IZC6 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC23.17■■□□□ 1.3
COL27A1Q8IZC6 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
COL27A1Q8IZC6 BX664725.1-201ENST00000438252 379 ntBASIC23.17■■□□□ 1.3
COL27A1Q8IZC6 MIR4787-201ENST00000607364 84 ntBASIC23.17■■□□□ 1.3
COL27A1Q8IZC6 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC23.17■■□□□ 1.3
COL27A1Q8IZC6 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC23.16■■□□□ 1.3
COL27A1Q8IZC6 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC23.16■■□□□ 1.3
COL27A1Q8IZC6 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
COL27A1Q8IZC6 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
COL27A1Q8IZC6 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC23.16■■□□□ 1.3
COL27A1Q8IZC6 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
COL27A1Q8IZC6 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC23.15■■□□□ 1.3
COL27A1Q8IZC6 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
COL27A1Q8IZC6 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
COL27A1Q8IZC6 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
COL27A1Q8IZC6 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC23.15■■□□□ 1.3
COL27A1Q8IZC6 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC23.15■■□□□ 1.3
COL27A1Q8IZC6 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC23.15■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 53.4 ms