Protein–RNA interactions for Protein: Q8IY18

SMC5, Structural maintenance of chromosomes protein 5, humanhuman

Predictions only

Length 1,101 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5Q8IY18 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC30.12■■■□□ 2.41
SMC5Q8IY18 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC30.12■■■□□ 2.41
SMC5Q8IY18 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC30.11■■■□□ 2.41
SMC5Q8IY18 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC30.11■■■□□ 2.41
SMC5Q8IY18 AC060814.1-201ENST00000554326 538 ntBASIC30.11■■■□□ 2.41
SMC5Q8IY18 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC30.11■■■□□ 2.41
SMC5Q8IY18 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
SMC5Q8IY18 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
SMC5Q8IY18 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
SMC5Q8IY18 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
SMC5Q8IY18 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
SMC5Q8IY18 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
SMC5Q8IY18 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC30.1■■■□□ 2.41
SMC5Q8IY18 PVT1-219ENST00000523427 938 ntTSL 3 BASIC30.1■■■□□ 2.41
SMC5Q8IY18 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC30.1■■■□□ 2.41
SMC5Q8IY18 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC30.09■■■□□ 2.41
SMC5Q8IY18 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC30.09■■■□□ 2.41
SMC5Q8IY18 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC30.09■■■□□ 2.41
SMC5Q8IY18 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC30.09■■■□□ 2.41
SMC5Q8IY18 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC30.09■■■□□ 2.41
SMC5Q8IY18 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC30.09■■■□□ 2.41
SMC5Q8IY18 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC30.09■■■□□ 2.41
SMC5Q8IY18 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC30.09■■■□□ 2.41
SMC5Q8IY18 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC30.09■■■□□ 2.41
SMC5Q8IY18 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC30.09■■■□□ 2.41
SMC5Q8IY18 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC30.09■■■□□ 2.41
SMC5Q8IY18 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC30.09■■■□□ 2.41
SMC5Q8IY18 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC30.09■■■□□ 2.41
SMC5Q8IY18 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC30.09■■■□□ 2.41
SMC5Q8IY18 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC30.09■■■□□ 2.41
SMC5Q8IY18 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC30.09■■■□□ 2.41
SMC5Q8IY18 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC30.09■■■□□ 2.41
SMC5Q8IY18 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC30.08■■■□□ 2.41
SMC5Q8IY18 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC30.08■■■□□ 2.41
SMC5Q8IY18 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC30.08■■■□□ 2.41
SMC5Q8IY18 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC30.08■■■□□ 2.41
SMC5Q8IY18 MOB2-207ENST00000614710 705 ntTSL 5 BASIC30.08■■■□□ 2.41
SMC5Q8IY18 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC30.08■■■□□ 2.41
SMC5Q8IY18 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
SMC5Q8IY18 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
SMC5Q8IY18 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
SMC5Q8IY18 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC30.07■■■□□ 2.4
SMC5Q8IY18 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
SMC5Q8IY18 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC30.07■■■□□ 2.4
SMC5Q8IY18 AC025884.2-201ENST00000553429 711 ntBASIC30.07■■■□□ 2.4
SMC5Q8IY18 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
SMC5Q8IY18 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC30.06■■■□□ 2.4
SMC5Q8IY18 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC30.06■■■□□ 2.4
SMC5Q8IY18 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC30.06■■■□□ 2.4
SMC5Q8IY18 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC30.05■■■□□ 2.4
SMC5Q8IY18 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
SMC5Q8IY18 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC30.04■■■□□ 2.4
SMC5Q8IY18 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC30.04■■■□□ 2.4
SMC5Q8IY18 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC30.04■■■□□ 2.4
SMC5Q8IY18 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC30.04■■■□□ 2.4
SMC5Q8IY18 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC30.03■■■□□ 2.4
SMC5Q8IY18 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
SMC5Q8IY18 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC30.03■■■□□ 2.4
SMC5Q8IY18 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC30.03■■■□□ 2.4
SMC5Q8IY18 AC092296.2-201ENST00000589470 999 ntBASIC30.03■■■□□ 2.4
SMC5Q8IY18 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC30.03■■■□□ 2.4
SMC5Q8IY18 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC30.02■■■□□ 2.4
SMC5Q8IY18 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC30.02■■■□□ 2.4
SMC5Q8IY18 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC30.02■■■□□ 2.4
SMC5Q8IY18 SRP68-213ENST00000629930 165 ntTSL 5 BASIC30.02■■■□□ 2.4
SMC5Q8IY18 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC30.01■■■□□ 2.4
SMC5Q8IY18 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC30.01■■■□□ 2.4
SMC5Q8IY18 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.39
SMC5Q8IY18 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC30.01■■■□□ 2.39
SMC5Q8IY18 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC30.01■■■□□ 2.39
SMC5Q8IY18 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
SMC5Q8IY18 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC30■■■□□ 2.39
SMC5Q8IY18 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
SMC5Q8IY18 PFN2-211ENST00000489155 636 ntTSL 4 BASIC30■■■□□ 2.39
SMC5Q8IY18 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC29.99■■■□□ 2.39
SMC5Q8IY18 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC29.98■■■□□ 2.39
SMC5Q8IY18 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
SMC5Q8IY18 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC29.98■■■□□ 2.39
SMC5Q8IY18 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC29.98■■■□□ 2.39
SMC5Q8IY18 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC29.97■■■□□ 2.39
SMC5Q8IY18 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC29.97■■■□□ 2.39
SMC5Q8IY18 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC29.97■■■□□ 2.39
SMC5Q8IY18 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC29.97■■■□□ 2.39
SMC5Q8IY18 SNAI3-AS1-204ENST00000567997 2048 ntBASIC29.97■■■□□ 2.39
SMC5Q8IY18 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC29.97■■■□□ 2.39
SMC5Q8IY18 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC29.97■■■□□ 2.39
SMC5Q8IY18 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC29.97■■■□□ 2.39
SMC5Q8IY18 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC29.97■■■□□ 2.39
SMC5Q8IY18 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC29.97■■■□□ 2.39
SMC5Q8IY18 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC29.96■■■□□ 2.39
SMC5Q8IY18 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC29.96■■■□□ 2.39
SMC5Q8IY18 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC29.96■■■□□ 2.39
SMC5Q8IY18 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC29.96■■■□□ 2.39
SMC5Q8IY18 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC29.95■■■□□ 2.39
SMC5Q8IY18 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC29.95■■■□□ 2.39
SMC5Q8IY18 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC29.95■■■□□ 2.38
SMC5Q8IY18 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC29.95■■■□□ 2.38
SMC5Q8IY18 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC29.95■■■□□ 2.38
SMC5Q8IY18 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC29.95■■■□□ 2.38
SMC5Q8IY18 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC29.95■■■□□ 2.38
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms