Protein–RNA interactions for Protein: Q8IWR1

TRIM59, Tripartite motif-containing protein 59, humanhuman

Predictions only

Length 403 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM59Q8IWR1 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
TRIM59Q8IWR1 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC26.42■■□□□ 1.82
TRIM59Q8IWR1 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
TRIM59Q8IWR1 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC26.41■■□□□ 1.82
TRIM59Q8IWR1 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
TRIM59Q8IWR1 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC26.41■■□□□ 1.82
TRIM59Q8IWR1 MOB2-207ENST00000614710 705 ntTSL 5 BASIC26.41■■□□□ 1.82
TRIM59Q8IWR1 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
TRIM59Q8IWR1 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
TRIM59Q8IWR1 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC26.4■■□□□ 1.82
TRIM59Q8IWR1 SRP68-213ENST00000629930 165 ntTSL 5 BASIC26.4■■□□□ 1.82
TRIM59Q8IWR1 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC26.4■■□□□ 1.82
TRIM59Q8IWR1 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
TRIM59Q8IWR1 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
TRIM59Q8IWR1 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
TRIM59Q8IWR1 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
TRIM59Q8IWR1 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
TRIM59Q8IWR1 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
TRIM59Q8IWR1 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC26.39■■□□□ 1.82
TRIM59Q8IWR1 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC26.39■■□□□ 1.82
TRIM59Q8IWR1 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC26.39■■□□□ 1.81
TRIM59Q8IWR1 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC26.38■■□□□ 1.81
TRIM59Q8IWR1 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC26.38■■□□□ 1.81
TRIM59Q8IWR1 AC025884.2-201ENST00000553429 711 ntBASIC26.38■■□□□ 1.81
TRIM59Q8IWR1 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC26.37■■□□□ 1.81
TRIM59Q8IWR1 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
TRIM59Q8IWR1 AC092296.2-201ENST00000589470 999 ntBASIC26.37■■□□□ 1.81
TRIM59Q8IWR1 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC26.37■■□□□ 1.81
TRIM59Q8IWR1 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC26.36■■□□□ 1.81
TRIM59Q8IWR1 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC26.36■■□□□ 1.81
TRIM59Q8IWR1 TPT1-202ENST00000379055 948 ntTSL 2 BASIC26.36■■□□□ 1.81
TRIM59Q8IWR1 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC26.36■■□□□ 1.81
TRIM59Q8IWR1 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC26.36■■□□□ 1.81
TRIM59Q8IWR1 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC26.36■■□□□ 1.81
TRIM59Q8IWR1 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC26.35■■□□□ 1.81
TRIM59Q8IWR1 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
TRIM59Q8IWR1 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
TRIM59Q8IWR1 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC26.34■■□□□ 1.81
TRIM59Q8IWR1 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC26.34■■□□□ 1.81
TRIM59Q8IWR1 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
TRIM59Q8IWR1 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
TRIM59Q8IWR1 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
TRIM59Q8IWR1 CEBPA-AS1-201ENST00000592982 2198 ntBASIC26.33■■□□□ 1.81
TRIM59Q8IWR1 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
TRIM59Q8IWR1 PFN2-211ENST00000489155 636 ntTSL 4 BASIC26.33■■□□□ 1.81
TRIM59Q8IWR1 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
TRIM59Q8IWR1 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC26.33■■□□□ 1.8
TRIM59Q8IWR1 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
TRIM59Q8IWR1 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC26.32■■□□□ 1.8
TRIM59Q8IWR1 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC26.32■■□□□ 1.8
TRIM59Q8IWR1 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC26.32■■□□□ 1.8
TRIM59Q8IWR1 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
TRIM59Q8IWR1 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
TRIM59Q8IWR1 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC26.31■■□□□ 1.8
TRIM59Q8IWR1 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
TRIM59Q8IWR1 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
TRIM59Q8IWR1 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC26.31■■□□□ 1.8
TRIM59Q8IWR1 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC26.31■■□□□ 1.8
TRIM59Q8IWR1 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC26.31■■□□□ 1.8
TRIM59Q8IWR1 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
TRIM59Q8IWR1 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
TRIM59Q8IWR1 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC26.3■■□□□ 1.8
TRIM59Q8IWR1 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC26.3■■□□□ 1.8
TRIM59Q8IWR1 MIR4449-201ENST00000578365 66 ntBASIC26.3■■□□□ 1.8
TRIM59Q8IWR1 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC26.3■■□□□ 1.8
TRIM59Q8IWR1 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
TRIM59Q8IWR1 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC26.3■■□□□ 1.8
TRIM59Q8IWR1 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC26.3■■□□□ 1.8
TRIM59Q8IWR1 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC26.29■■□□□ 1.8
TRIM59Q8IWR1 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
TRIM59Q8IWR1 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
TRIM59Q8IWR1 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
TRIM59Q8IWR1 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC26.28■■□□□ 1.8
TRIM59Q8IWR1 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC26.28■■□□□ 1.8
TRIM59Q8IWR1 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC26.28■■□□□ 1.8
TRIM59Q8IWR1 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
TRIM59Q8IWR1 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC26.27■■□□□ 1.8
TRIM59Q8IWR1 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC26.27■■□□□ 1.8
TRIM59Q8IWR1 SMPD5-203ENST00000639008 1464 ntBASIC26.27■■□□□ 1.8
TRIM59Q8IWR1 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC26.27■■□□□ 1.8
TRIM59Q8IWR1 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC26.27■■□□□ 1.8
TRIM59Q8IWR1 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC26.27■■□□□ 1.8
TRIM59Q8IWR1 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
TRIM59Q8IWR1 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
TRIM59Q8IWR1 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC26.26■■□□□ 1.79
TRIM59Q8IWR1 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC26.26■■□□□ 1.79
TRIM59Q8IWR1 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
TRIM59Q8IWR1 MBP-237ENST00000579129 1052 ntTSL 5 BASIC26.26■■□□□ 1.79
TRIM59Q8IWR1 AC022413.1-201ENST00000624602 984 ntBASIC26.26■■□□□ 1.79
TRIM59Q8IWR1 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC26.26■■□□□ 1.79
TRIM59Q8IWR1 AC135731.1-201ENST00000569415 2548 ntBASIC26.25■■□□□ 1.79
TRIM59Q8IWR1 ECEL1P2-201ENST00000461596 1295 ntBASIC26.25■■□□□ 1.79
TRIM59Q8IWR1 MIR3960-201ENST00000583311 91 ntBASIC26.25■■□□□ 1.79
TRIM59Q8IWR1 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC26.25■■□□□ 1.79
TRIM59Q8IWR1 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
TRIM59Q8IWR1 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC26.24■■□□□ 1.79
TRIM59Q8IWR1 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC26.24■■□□□ 1.79
TRIM59Q8IWR1 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC26.23■■□□□ 1.79
TRIM59Q8IWR1 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC26.23■■□□□ 1.79
TRIM59Q8IWR1 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC26.23■■□□□ 1.79
Retrieved 100 of 98,524 protein–RNA pairs in 128.7 ms