Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
RNF135Q8IUD6 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
RNF135Q8IUD6 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC25.71■■□□□ 1.71
RNF135Q8IUD6 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
RNF135Q8IUD6 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC25.71■■□□□ 1.71
RNF135Q8IUD6 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC25.71■■□□□ 1.71
RNF135Q8IUD6 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC25.71■■□□□ 1.71
RNF135Q8IUD6 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
RNF135Q8IUD6 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC25.71■■□□□ 1.71
RNF135Q8IUD6 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
RNF135Q8IUD6 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC25.7■■□□□ 1.7
RNF135Q8IUD6 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
RNF135Q8IUD6 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
RNF135Q8IUD6 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
RNF135Q8IUD6 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
RNF135Q8IUD6 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC25.69■■□□□ 1.7
RNF135Q8IUD6 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC25.69■■□□□ 1.7
RNF135Q8IUD6 TK2-216ENST00000564917 1156 ntTSL 3 BASIC25.69■■□□□ 1.7
RNF135Q8IUD6 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC25.69■■□□□ 1.7
RNF135Q8IUD6 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC25.69■■□□□ 1.7
RNF135Q8IUD6 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC25.69■■□□□ 1.7
RNF135Q8IUD6 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC25.69■■□□□ 1.7
RNF135Q8IUD6 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
RNF135Q8IUD6 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC25.68■■□□□ 1.7
RNF135Q8IUD6 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC25.68■■□□□ 1.7
RNF135Q8IUD6 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
RNF135Q8IUD6 AC019171.1-201ENST00000601251 1056 ntBASIC25.67■■□□□ 1.7
RNF135Q8IUD6 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
RNF135Q8IUD6 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC25.66■■□□□ 1.7
RNF135Q8IUD6 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC25.66■■□□□ 1.7
RNF135Q8IUD6 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
RNF135Q8IUD6 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC25.66■■□□□ 1.7
RNF135Q8IUD6 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
RNF135Q8IUD6 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC25.66■■□□□ 1.7
RNF135Q8IUD6 AC142086.6-201ENST00000621154 1765 ntBASIC25.66■■□□□ 1.7
RNF135Q8IUD6 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC25.66■■□□□ 1.7
RNF135Q8IUD6 AP002414.2-202ENST00000590929 1450 ntBASIC25.66■■□□□ 1.7
RNF135Q8IUD6 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
RNF135Q8IUD6 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC25.64■■□□□ 1.7
RNF135Q8IUD6 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC25.64■■□□□ 1.7
RNF135Q8IUD6 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC25.64■■□□□ 1.7
RNF135Q8IUD6 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC25.64■■□□□ 1.69
RNF135Q8IUD6 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
RNF135Q8IUD6 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
RNF135Q8IUD6 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
RNF135Q8IUD6 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
RNF135Q8IUD6 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
RNF135Q8IUD6 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
RNF135Q8IUD6 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
RNF135Q8IUD6 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
RNF135Q8IUD6 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC25.62■■□□□ 1.69
RNF135Q8IUD6 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC25.62■■□□□ 1.69
RNF135Q8IUD6 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
RNF135Q8IUD6 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC25.62■■□□□ 1.69
RNF135Q8IUD6 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC25.62■■□□□ 1.69
RNF135Q8IUD6 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
RNF135Q8IUD6 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC25.6■■□□□ 1.69
RNF135Q8IUD6 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC25.6■■□□□ 1.69
RNF135Q8IUD6 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC25.6■■□□□ 1.69
RNF135Q8IUD6 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC25.6■■□□□ 1.69
RNF135Q8IUD6 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC25.6■■□□□ 1.69
RNF135Q8IUD6 AL139246.5-201ENST00000606645 996 ntBASIC25.6■■□□□ 1.69
RNF135Q8IUD6 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
RNF135Q8IUD6 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC25.6■■□□□ 1.69
RNF135Q8IUD6 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC25.59■■□□□ 1.69
RNF135Q8IUD6 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC25.59■■□□□ 1.69
RNF135Q8IUD6 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC25.59■■□□□ 1.69
RNF135Q8IUD6 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC25.59■■□□□ 1.69
RNF135Q8IUD6 KRT125P-201ENST00000546827 989 ntBASIC25.59■■□□□ 1.69
RNF135Q8IUD6 RALB-208ENST00000631312 311 ntTSL 5 BASIC25.59■■□□□ 1.69
RNF135Q8IUD6 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
RNF135Q8IUD6 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC25.58■■□□□ 1.69
RNF135Q8IUD6 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC25.58■■□□□ 1.69
RNF135Q8IUD6 MIR4787-201ENST00000607364 84 ntBASIC25.58■■□□□ 1.69
RNF135Q8IUD6 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC25.58■■□□□ 1.69
RNF135Q8IUD6 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
RNF135Q8IUD6 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC25.57■■□□□ 1.68
RNF135Q8IUD6 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
RNF135Q8IUD6 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC25.57■■□□□ 1.68
RNF135Q8IUD6 LONRF2P2-201ENST00000439212 571 ntBASIC25.57■■□□□ 1.68
RNF135Q8IUD6 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC25.57■■□□□ 1.68
RNF135Q8IUD6 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC25.57■■□□□ 1.68
RNF135Q8IUD6 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC25.57■■□□□ 1.68
RNF135Q8IUD6 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC25.57■■□□□ 1.68
RNF135Q8IUD6 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
RNF135Q8IUD6 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
RNF135Q8IUD6 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC25.56■■□□□ 1.68
RNF135Q8IUD6 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
RNF135Q8IUD6 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
RNF135Q8IUD6 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
RNF135Q8IUD6 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
RNF135Q8IUD6 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC25.56■■□□□ 1.68
RNF135Q8IUD6 NALT1-201ENST00000429224 738 ntTSL 5 BASIC25.55■■□□□ 1.68
RNF135Q8IUD6 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC25.55■■□□□ 1.68
RNF135Q8IUD6 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
RNF135Q8IUD6 PROC-203ENST00000409048 1586 ntTSL 5 BASIC25.55■■□□□ 1.68
RNF135Q8IUD6 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
RNF135Q8IUD6 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC25.54■■□□□ 1.68
RNF135Q8IUD6 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC25.54■■□□□ 1.68
RNF135Q8IUD6 UNC93B8-201ENST00000511903 705 ntBASIC25.54■■□□□ 1.68
Retrieved 100 of 98,524 protein–RNA pairs in 75.5 ms