Protein–RNA interactions for Protein: Q8CI71

Vps50, Syndetin, mousemouse

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps50Q8CI71 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC21.33■■□□□ 1.01
Vps50Q8CI71 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC21.33■■□□□ 1
Vps50Q8CI71 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Vps50Q8CI71 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Vps50Q8CI71 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC21.32■■□□□ 1
Vps50Q8CI71 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC21.32■■□□□ 1
Vps50Q8CI71 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
Vps50Q8CI71 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
Vps50Q8CI71 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC21.32■■□□□ 1
Vps50Q8CI71 AC124392.1-201ENSMUST00000225172 5324 ntBASIC21.31■■□□□ 1
Vps50Q8CI71 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Vps50Q8CI71 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC21.31■■□□□ 1
Vps50Q8CI71 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC21.31■■□□□ 1
Vps50Q8CI71 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
Vps50Q8CI71 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC21.3■■□□□ 1
Vps50Q8CI71 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
Vps50Q8CI71 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC21.3■■□□□ 1
Vps50Q8CI71 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
Vps50Q8CI71 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Vps50Q8CI71 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Vps50Q8CI71 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
Vps50Q8CI71 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
Vps50Q8CI71 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC21.3■■□□□ 1
Vps50Q8CI71 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Vps50Q8CI71 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
Vps50Q8CI71 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Vps50Q8CI71 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Vps50Q8CI71 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC21.29■■□□□ 1
Vps50Q8CI71 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Vps50Q8CI71 Gm14121-201ENSMUST00000121441 1380 ntBASIC21.29■■□□□ 1
Vps50Q8CI71 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC21.29■■□□□ 1
Vps50Q8CI71 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC21.29■■□□□ 1
Vps50Q8CI71 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Vps50Q8CI71 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
Vps50Q8CI71 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC21.28■■□□□ 1
Vps50Q8CI71 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Vps50Q8CI71 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
Vps50Q8CI71 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
Vps50Q8CI71 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC21.28■■□□□ 1
Vps50Q8CI71 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Vps50Q8CI71 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Vps50Q8CI71 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC21.28■■□□□ 1
Vps50Q8CI71 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Vps50Q8CI71 Gm9910-201ENSMUST00000195385 1550 ntBASIC21.27■■□□□ 1
Vps50Q8CI71 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC21.27■■□□□ 1
Vps50Q8CI71 Gm12366-201ENSMUST00000121722 873 ntBASIC21.27■■□□□ 1
Vps50Q8CI71 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC21.27■■□□□ 1
Vps50Q8CI71 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC21.27■■□□□ 1
Vps50Q8CI71 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC21.27■■□□□ 1
Vps50Q8CI71 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC21.27■■□□□ 1
Vps50Q8CI71 Gm5786-201ENSMUST00000085368 882 ntBASIC21.27■■□□□ 1
Vps50Q8CI71 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC21.27■■□□□ 1
Vps50Q8CI71 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Vps50Q8CI71 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC21.27■□□□□ 0.99
Vps50Q8CI71 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Vps50Q8CI71 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Vps50Q8CI71 Gm6277-202ENSMUST00000224036 2779 ntBASIC21.26■□□□□ 0.99
Vps50Q8CI71 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Vps50Q8CI71 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC21.26■□□□□ 0.99
Vps50Q8CI71 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Vps50Q8CI71 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Vps50Q8CI71 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Vps50Q8CI71 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Vps50Q8CI71 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Vps50Q8CI71 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Vps50Q8CI71 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Vps50Q8CI71 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
Vps50Q8CI71 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Vps50Q8CI71 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Vps50Q8CI71 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Vps50Q8CI71 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
Vps50Q8CI71 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Vps50Q8CI71 Terc-201ENSMUST00000082862 423 ntBASIC21.25■□□□□ 0.99
Vps50Q8CI71 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Vps50Q8CI71 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
Vps50Q8CI71 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Vps50Q8CI71 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC21.24■□□□□ 0.99
Vps50Q8CI71 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Vps50Q8CI71 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Vps50Q8CI71 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Vps50Q8CI71 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Vps50Q8CI71 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Vps50Q8CI71 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Vps50Q8CI71 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC21.24■□□□□ 0.99
Vps50Q8CI71 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
Vps50Q8CI71 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Vps50Q8CI71 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Vps50Q8CI71 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Vps50Q8CI71 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC21.24■□□□□ 0.99
Vps50Q8CI71 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC21.24■□□□□ 0.99
Vps50Q8CI71 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Vps50Q8CI71 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC21.24■□□□□ 0.99
Vps50Q8CI71 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC21.23■□□□□ 0.99
Vps50Q8CI71 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
Vps50Q8CI71 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC21.23■□□□□ 0.99
Vps50Q8CI71 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Vps50Q8CI71 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Vps50Q8CI71 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Vps50Q8CI71 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Vps50Q8CI71 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 68.8 ms