Protein–RNA interactions for Protein: Q8C3R1

Brat1, BRCA1-associated ATM activator 1, mousemouse

Predictions only

Length 822 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brat1Q8C3R1 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC23.21■■□□□ 1.31
Brat1Q8C3R1 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Brat1Q8C3R1 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Brat1Q8C3R1 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Brat1Q8C3R1 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
Brat1Q8C3R1 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Brat1Q8C3R1 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC23.21■■□□□ 1.31
Brat1Q8C3R1 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Brat1Q8C3R1 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC23.2■■□□□ 1.3
Brat1Q8C3R1 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Brat1Q8C3R1 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC23.2■■□□□ 1.3
Brat1Q8C3R1 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Brat1Q8C3R1 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Brat1Q8C3R1 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Brat1Q8C3R1 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC23.19■■□□□ 1.3
Brat1Q8C3R1 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC23.19■■□□□ 1.3
Brat1Q8C3R1 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC23.19■■□□□ 1.3
Brat1Q8C3R1 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC23.19■■□□□ 1.3
Brat1Q8C3R1 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
Brat1Q8C3R1 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC23.19■■□□□ 1.3
Brat1Q8C3R1 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC23.19■■□□□ 1.3
Brat1Q8C3R1 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Brat1Q8C3R1 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Brat1Q8C3R1 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Brat1Q8C3R1 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Brat1Q8C3R1 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Brat1Q8C3R1 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC23.16■■□□□ 1.3
Brat1Q8C3R1 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC23.16■■□□□ 1.3
Brat1Q8C3R1 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Brat1Q8C3R1 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Brat1Q8C3R1 AC117245.4-201ENSMUST00000217388 1646 ntBASIC23.15■■□□□ 1.3
Brat1Q8C3R1 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Brat1Q8C3R1 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC23.15■■□□□ 1.3
Brat1Q8C3R1 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Brat1Q8C3R1 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC23.15■■□□□ 1.3
Brat1Q8C3R1 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC23.15■■□□□ 1.3
Brat1Q8C3R1 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Brat1Q8C3R1 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Brat1Q8C3R1 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC23.14■■□□□ 1.3
Brat1Q8C3R1 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC23.14■■□□□ 1.3
Brat1Q8C3R1 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
Brat1Q8C3R1 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
Brat1Q8C3R1 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.29
Brat1Q8C3R1 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC23.13■■□□□ 1.29
Brat1Q8C3R1 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC23.13■■□□□ 1.29
Brat1Q8C3R1 Gm5921-201ENSMUST00000075898 882 ntBASIC23.13■■□□□ 1.29
Brat1Q8C3R1 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC23.13■■□□□ 1.29
Brat1Q8C3R1 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC23.13■■□□□ 1.29
Brat1Q8C3R1 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Brat1Q8C3R1 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Brat1Q8C3R1 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Brat1Q8C3R1 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
Brat1Q8C3R1 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Brat1Q8C3R1 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
Brat1Q8C3R1 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC23.11■■□□□ 1.29
Brat1Q8C3R1 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Brat1Q8C3R1 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
Brat1Q8C3R1 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
Brat1Q8C3R1 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC23.09■■□□□ 1.29
Brat1Q8C3R1 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Brat1Q8C3R1 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC23.08■■□□□ 1.29
Brat1Q8C3R1 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Brat1Q8C3R1 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC23.08■■□□□ 1.29
Brat1Q8C3R1 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC23.08■■□□□ 1.29
Brat1Q8C3R1 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC23.08■■□□□ 1.28
Brat1Q8C3R1 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
Brat1Q8C3R1 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Brat1Q8C3R1 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Brat1Q8C3R1 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC23.06■■□□□ 1.28
Brat1Q8C3R1 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC23.06■■□□□ 1.28
Brat1Q8C3R1 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC23.06■■□□□ 1.28
Brat1Q8C3R1 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Brat1Q8C3R1 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC23.06■■□□□ 1.28
Brat1Q8C3R1 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC23.06■■□□□ 1.28
Brat1Q8C3R1 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC23.06■■□□□ 1.28
Brat1Q8C3R1 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC23.06■■□□□ 1.28
Brat1Q8C3R1 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC23.06■■□□□ 1.28
Brat1Q8C3R1 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Brat1Q8C3R1 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Brat1Q8C3R1 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC23.05■■□□□ 1.28
Brat1Q8C3R1 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
Brat1Q8C3R1 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Brat1Q8C3R1 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
Brat1Q8C3R1 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Brat1Q8C3R1 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC23.05■■□□□ 1.28
Brat1Q8C3R1 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
Brat1Q8C3R1 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Brat1Q8C3R1 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC23.04■■□□□ 1.28
Brat1Q8C3R1 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC23.04■■□□□ 1.28
Brat1Q8C3R1 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC23.04■■□□□ 1.28
Brat1Q8C3R1 Nsd1-203ENSMUST00000224156 1149 ntBASIC23.04■■□□□ 1.28
Brat1Q8C3R1 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
Brat1Q8C3R1 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Brat1Q8C3R1 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Brat1Q8C3R1 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Brat1Q8C3R1 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC23.03■■□□□ 1.28
Brat1Q8C3R1 Gm22567-201ENSMUST00000175542 342 ntBASIC23.03■■□□□ 1.28
Brat1Q8C3R1 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC23.03■■□□□ 1.28
Brat1Q8C3R1 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Brat1Q8C3R1 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC23.02■■□□□ 1.28
Retrieved 100 of 76,532 protein–RNA pairs in 15.5 ms